RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SLC38A2Q96QD8 506 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 KATNB1Q9BVA0 655 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 SF3B5Q9BWJ5 86 aaKnown RBP13.96□□□□□ -0.17
VCX3A-201ENST00000381089 RAB1BQ9H0U4 201 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 PIF1Q9H611 641 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 CA10Q9NS85 328 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 TMEM45AQ9NWC5 275 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 ASIC5Q9NY37 505 aa13.96□□□□□ -0.17
VCX3A-201ENST00000381089 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 PRSS51A0A1B0GVH4 220 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 TCF21O43680 179 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 BCAS1O75363 584 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 SNUPNO95149 360 aaKnown RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 CPSF4O95639 269 aaKnown RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 GPIP06744 558 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 SLC1A3P43003 542 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 ANXA11P50995 505 aaKnown RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 SRSF2Q01130 221 aaKnown RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 OTUD3Q5T2D3 398 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 NUDCD3Q8IVD9 361 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 ZNF317Q96PQ6 595 aaPredicted RBP13.95□□□□□ -0.18
VCX3A-201ENST00000381089 DPY30Q9C005 99 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 BPESC1Q9GZL8 116 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
VCX3A-201ENST00000381089 IGHV1-18A0A0C4DH31 117 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 OR6C65A6NJZ3 312 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 ZNF587BE7ETH6 402 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 KLF11O14901 512 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 IMPDH2P12268 514 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 BGNP21810 368 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 TACR3P29371 465 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 SRP14P37108 136 aaKnown RBP13.94□□□□□ -0.18
VCX3A-201ENST00000381089 PPOXP50336 477 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 CHN2P52757 468 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
VCX3A-201ENST00000381089 HIKESHIQ53FT3 197 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 SAXO2Q658L1 398 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 UGT2A3Q6UWM9 527 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 GPAT4Q86UL3 456 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 ANKS4BQ8N8V4 417 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 OR4F15Q8NGB8 312 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 NEURL3Q96EH8 262 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 AURKBQ96GD4 344 aaPredicted RBP13.94□□□□□ -0.18
VCX3A-201ENST00000381089 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 TAPBPLQ9BX59 468 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 MARCOQ9UEW3 520 aaPredicted RBP13.94□□□□□ -0.18
VCX3A-201ENST00000381089 PCDHB14Q9Y5E9 798 aa13.94□□□□□ -0.18
VCX3A-201ENST00000381089 CLDN24A6NM45 220 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 FAAHO00519 579 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 AP3D1O14617 1153 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 SCN2BO60939 215 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 OR4A8P0C604 315 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 CXCR1P25024 350 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
VCX3A-201ENST00000381089 TXNL4AP83876 142 aaKnown RBP13.93□□□□□ -0.18
VCX3A-201ENST00000381089 FUT5Q11128 374 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 OR7A5Q15622 319 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 EFNB3Q15768 340 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 CHI3L2Q15782 390 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 DPY19L1Q2PZI1 675 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 C3orf36Q3SXR2 165 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 TBRG1Q3YBR2 411 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 VHLLQ6RSH7 139 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 HMGN2P46Q86SG4 172 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 ANKRD46Q86W74 232 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 ZNF440Q8IYI8 595 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 TRIML2Q8N7C3 387 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 WDR60Q8WVS4 1066 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 CNOT9Q92600 299 aaKnown RBP13.93□□□□□ -0.18
VCX3A-201ENST00000381089 HPS1Q92902 700 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 ZG16BQ96DA0 208 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 TRNT1Q96Q11 434 aaKnown RBP13.93□□□□□ -0.18
VCX3A-201ENST00000381089 SLC35A5Q9BS91 424 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 MED4Q9NPJ6 270 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 PRDM4Q9UKN5 801 aa13.93□□□□□ -0.18
VCX3A-201ENST00000381089 CFAP73A6NFT4 308 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 AQP7P3A6NL99 342 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 BIRC5O15392 142 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 AKR7A3O95154 331 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 VAMP5O95183 116 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 IL7RP16871 459 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 PCMT1P22061 227 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 CLNS1AP54105 237 aaKnown RBP13.92□□□□□ -0.18
VCX3A-201ENST00000381089 SLC18A1P54219 525 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 CEACAM7Q14002 265 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 GSTA3Q16772 222 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 TMEM99Q8N816 258 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 OR1K1Q8NGR3 316 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 NEU4Q8WWR8 484 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-201ENST00000381089 ZNF385AQ96PM9 386 aaKnown RBP13.92□□□□□ -0.18
VCX3A-201ENST00000381089 PLK3Q9H4B4 646 aa13.92□□□□□ -0.18
VCX3A-201ENST00000381089 TMEFF2Q9UIK5 374 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-201ENST00000381089 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms