RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 NAA11Q9BSU3 229 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF232Q9UNY5 417 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 SLC25A15Q9Y619 301 aa16.84■□□□□ 0.29
CBWD3-204ENST00000377349 NBEAL1Q6ZS30 2694 aa16.83■□□□□ 0.29
CBWD3-204ENST00000377349 GPR171O14626 319 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 FRS3O43559 492 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 SSX4O60224 188 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 TFPTP0C1Z6 253 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 ZCCHC18P0CG32 403 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 IMPDH2P12268 514 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 FKBP2P26885 142 aaKnown RBP16.83■□□□□ 0.28
CBWD3-204ENST00000377349 CLK1P49759 484 aaKnown RBP16.83■□□□□ 0.28
CBWD3-204ENST00000377349 NRF1Q16656 503 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 FBXW9Q5XUX1 488 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 SSX8Q7RTT4 187 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 GPAT4Q86UL3 456 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 GTF2H4Q92759 462 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 CACNG6Q9BXT2 260 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.28
CBWD3-204ENST00000377349 RAD21L1Q9H4I0 556 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 ARMC7Q9H6L4 198 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 FAIMQ9NVQ4 179 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 ADPRHL2Q9NX46 363 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 UPB1Q9UBR1 384 aa16.83■□□□□ 0.28
CBWD3-204ENST00000377349 CLIC1O00299 241 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 PRG2P13727 222 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 TTKP33981 857 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 HOXC5Q00444 222 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 CEACAM7Q14002 265 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 RGNQ15493 299 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 ZNF311Q5JNZ3 666 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 OTUD3Q5T2D3 398 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-204ENST00000377349 AGAP6Q5VW22 663 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 SERPINA11Q86U17 422 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 CLIP4Q8N3C7 705 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 PMM1Q92871 262 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 ASB6Q9NWX5 421 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 MALT1Q9UDY8 824 aa16.82■□□□□ 0.28
CBWD3-204ENST00000377349 DSPPQ9NZW4 1301 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 RNF212BA8MTL3 300 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 PDLIM1O00151 329 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 ZNF208O43345 1280 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 DNPH1O43598 174 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 EIF1BO60739 113 aaKnown RBP16.81■□□□□ 0.28
CBWD3-204ENST00000377349 AKR7A3O95154 331 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 CD40P25942 277 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 ZNF83P51522 516 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 SLC16A1P53985 500 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 AGKQ53H12 422 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 C6orf52Q5T4I8 152 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 WBP2NLQ6ICG8 309 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 PODNL1Q6PEZ8 512 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 OR52E4Q8NGH9 312 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 HTRA1Q92743 480 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 SPDL1Q96EA4 605 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 RADILQ96JH8 1075 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 TAPBPLQ9BX59 468 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 THUMPD1Q9NXG2 353 aaKnown RBP16.81■□□□□ 0.28
CBWD3-204ENST00000377349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-204ENST00000377349 TRAPPC4Q9Y296 219 aa16.81■□□□□ 0.28
CBWD3-204ENST00000377349 A0A0G2JPF8 293 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 A8MV72 311 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-204ENST00000377349 HNRNPCL2B2RXH8 293 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 HNRNPCL3B7ZW38 293 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 HNRNPCL1O60812 293 aaKnown RBP16.8■□□□□ 0.28
CBWD3-204ENST00000377349 GPIP06744 558 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 ITGA5P08648 1049 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 HNRNPCL4P0DMR1 293 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 CDH2P19022 906 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-204ENST00000377349 TMEM249Q2WGJ8 235 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 RNF220Q5VTB9 566 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 TMEM108Q6UXF1 575 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 NFKBIDQ8NI38 313 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 RNF217Q8TC41 542 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 DHRS9Q9BPW9 319 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 RHNO1Q9BSD3 238 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 C1QTNF6Q9BXI9 259 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 AMBRA1Q9C0C7 1298 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 CBLN4Q9NTU7 201 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 INTS9Q9NV88 658 aaKnown RBP16.8■□□□□ 0.28
CBWD3-204ENST00000377349 RPS6KB2Q9UBS0 482 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 POU2F3Q9UKI9 436 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 SLC9A8Q9Y2E8 581 aa16.8■□□□□ 0.28
CBWD3-204ENST00000377349 A0A096LPI6 279 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ELOA3DA6NLF2 546 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 FAAHO00519 579 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 TGDSO95455 350 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 PTAFRP25105 342 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ACAA2P42765 397 aaKnown RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 NUDT6P53370 316 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 H3F3AP84243 136 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 GABRA6Q16445 453 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ELOA3BQ3SY89 546 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 GCNT6Q5T4J0 391 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 TMEM99Q8N816 258 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 WDR31Q8NA23 367 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ELOA3Q8NG57 546 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 BBS10Q8TAM1 723 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 MUS81Q96NY9 551 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms