RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 H3F3CQ6NXT2 135 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 NEURL3Q96EH8 262 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 ACKR4Q9NPB9 350 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 GRHPRQ9UBQ7 328 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 EPHA6Q9UF33 1036 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 TIMM8BQ9Y5J9 83 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-202ENST00000355815 PIAS3Q9Y6X2 628 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 UNC13CQ8NB66 2214 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 C17orf113A0A1B0GUU1 675 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 TRABD2BA6NFA1 517 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 CLEC3AO75596 197 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 SLC2A10O95528 541 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 UBL4AP11441 157 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 KCNJ5P48544 419 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 METRNLQ641Q3 311 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 PRICKLE2Q7Z3G6 844 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 OR52I1Q8NGK6 324 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 GHSRQ92847 366 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 OR52A5Q9H2C5 316 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
SREBF1-202ENST00000355815 BRCA2P51587 3418 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 ICE1Q9Y2F5 2266 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 LRIT2A6NDA9 550 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SOX1O00570 391 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 MAGEB4O15481 346 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 DOK2O60496 412 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 UBBP0CG47 229 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 UBCP0CG48 685 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 GABRA5P31644 462 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 IGFALSP35858 605 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 DGCR2P98153 550 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SSX2Q16385 188 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SFXN4Q6P4A7 337 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TMEM255BQ8WV15 326 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 ACOT11Q8WXI4 607 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TANKQ92844 425 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TRBV5-3A0A0A0MS03 114 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 CCDC163A0A0D9SF12 145 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 CCSO14618 274 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 HRO43593 1189 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SNAPINO95295 136 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 ACP2P11117 423 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PDX1P52945 283 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 IL13RA1P78552 427 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 AANATQ16613 207 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TRMT12Q53H54 448 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 LAIR1Q6GTX8 287 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SGPP1Q9BX95 441 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 ACTRT3Q9BYD9 372 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SRRQ9GZT4 340 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PELI2Q9HAT8 420 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 KCNJ16Q9NPI9 418 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 C14orf166Q9Y224 244 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 M0R082 166 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 HLA-AP01891 365 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 GLAP06280 429 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 GPR157Q5UAW9 335 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SHISA6Q6ZSJ9 500 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 RAB11FIP2Q7L804 512 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PNLDC1Q8NA58 520 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 LMX1AQ8TE12 382 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 SLAMF9Q96A28 289 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 CNN2Q99439 309 aaKnown RBP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 FAM83CQ9BQN1 747 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
SREBF1-202ENST00000355815 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
SREBF1-202ENST00000355815 A0A087WUU8 490 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 PRAF2O60831 178 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 NDUFS1P28331 727 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-202ENST00000355815 Q6ZSR6 202 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 PRR22Q8IZ63 422 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 OR9A4Q8NGU2 314 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 FBXW5Q969U6 566 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 SLC25A46Q96AG3 418 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 PCYT1BQ9Y5K3 369 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-202ENST00000355815 ACOT7O00154 380 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 TNFP01375 233 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 PPP3CBP16298 524 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 GABRB1P18505 474 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 NME2P22392 152 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 SOX18P35713 384 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-202ENST00000355815 MAT1AQ00266 395 aaKnown RBP13.03□□□□□ -0.32
SREBF1-202ENST00000355815 CACNA1EQ15878 2313 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 ZBTB37Q5TC79 503 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 HEPHL1Q6MZM0 1159 aa13.03□□□□□ -0.32
SREBF1-202ENST00000355815 PAPD4Q6PIY7 484 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms