RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 FBXW5Q969U6 566 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 DCLRE1CQ96SD1 692 aaKnown RBP5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 UBQLN4Q9NRR5 601 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 A6NIN4 97 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 PSMB3P49720 205 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 EGFL6Q8IUX8 553 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 ADAMTS16Q8TE57 1224 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 GABRQQ9UN88 632 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 MYO7AQ13402 2215 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 EIF3FO00303 357 aaPredicted RBP5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 BMP1P13497 986 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 MAKP20794 623 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 DEFA6Q01524 100 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 C4orf17Q53FE4 359 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 OR7E24Q6IFN5 339 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 MYH13Q9UKX3 1938 aa5.4□□□□□ -1.54
SRGAP1-201ENST00000355086 KIR2DS5A0A0G2JLQ3 304 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 A0A0G2JNG1 304 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 KIR2DS3K7RE56 304 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 FABP1P07148 127 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 BLVRBP30043 206 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SSR4P51571 173 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 POU3F1Q03052 451 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 KIR2DS5Q14953 304 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 FER1L6-AS2Q96M78 137 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ERVMER34-1Q9H9K5 563 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 IL26Q9NPH9 171 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 TM7SF3Q9NS93 570 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 MTCH1Q9NZJ7 389 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GALR3O60755 368 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 WNT11O96014 354 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 HLA-HP01893 362 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ADH4P08319 380 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 FCGR2AP12318 317 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CD70P32970 193 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PGGT1BP53609 377 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 B3GNT7Q8NFL0 401 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GIMAP1Q8WWP7 306 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 MST1RQ04912 1400 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF593O00488 134 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 MRPS14O60783 128 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PAGE3Q5JUK9 113 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CNTN4Q8IWV2 1026 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC15A4Q8N697 577 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CPNE5Q9HCH3 593 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 KEAP1Q14145 624 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SYT13Q7L8C5 426 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 OR10X1Q8NGY0 326 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 LOXHD1Q8IVV2 1947 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CDC14CA4D256 554 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PPT1P50897 306 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 EXOSC7Q15024 291 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 EBPQ15125 230 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 IRF4Q15306 451 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 RAB3CQ96E17 227 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 WDR83Q9BRX9 315 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 TWSG1Q9GZX9 223 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GABRR3A8MPY1 467 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GPR39O43194 453 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ITGB7P26010 798 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ITGB8P26012 769 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 NUDT1P36639 197 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ZP2Q05996 745 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 NLRP8Q86W28 1048 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CCDC71Q8IV32 467 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SIMC1Q8NDZ2 872 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 OR52E1Q8NGJ3 308 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ZC3HAV1LQ96H79 300 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PURGQ9UJV8 347 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PLIN4Q96Q06 1357 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 BCL9LQ86UU0 1499 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 IGKV6D-41A0A0C4DH26 115 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 HSD17B6O14756 317 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 RGS11O94810 467 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 M6PRP20645 277 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 AHRP35869 848 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 OPRL1P41146 370 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF266Q14584 549 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF468Q5VIY5 522 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CPEB3Q8NE35 698 aaKnown RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 M1APQ8TC57 530 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CORO2AQ92828 525 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 BOD1Q96IK1 185 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GNB2P62879 340 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 CPZQ66K79 652 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 TMEM104Q8NE00 496 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 KATNB1Q9BVA0 655 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SRPXP78539 464 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 GALEQ14376 348 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 AAED1Q7RTV5 226 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 PDZD3Q86UT5 571 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC35F3Q8IY50 421 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC41A2Q96JW4 573 aa5.4□□□□□ -1.55
SRGAP1-201ENST00000355086 RAB19A4D1S5 217 aa5.39□□□□□ -1.55
SRGAP1-201ENST00000355086 GYPBP06028 91 aa5.39□□□□□ -1.55
SRGAP1-201ENST00000355086 GM2AP17900 193 aa5.39□□□□□ -1.55
SRGAP1-201ENST00000355086 TBC1D28Q2M2D7 210 aa5.39□□□□□ -1.55
SRGAP1-201ENST00000355086 HACD4Q5VWC8 232 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms