RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NAA50Q9GZZ1 169 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 OR52D1Q9H346 318 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 SDHAF3Q9NRP4 125 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 DEPPQ9NTK1 212 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 PCNX3Q9H6A9 2034 aa17.01■□□□□ 0.31
EXOSC3-201ENST00000327304 IGLV3-32A0A0A0MS00 114 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 EFCAB9A8MZ26 197 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 SURF4O15260 269 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 PSMB9P28065 219 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 SLC6A8P48029 635 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 P2RX1P51575 399 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 GPR85P60893 370 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 ARG2P78540 354 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 ZNF91Q05481 1191 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 CLEC12AQ5QGZ9 265 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 RNLSQ5VYX0 342 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 WDSUB1Q8N9V3 476 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 FANK1Q8TC84 345 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 YIPF6Q96EC8 236 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 SAMD8Q96LT4 415 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 ZNF582Q96NG8 517 aaPredicted RBP17■□□□□ 0.31
EXOSC3-201ENST00000327304 SMAD5Q99717 465 aaKnown RBP17■□□□□ 0.31
EXOSC3-201ENST00000327304 SLC19A3Q9BZV2 496 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 MRPS18AQ9NVS2 196 aaKnown RBP17■□□□□ 0.31
EXOSC3-201ENST00000327304 ENPP5Q9UJA9 477 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 SIGLEC7Q9Y286 467 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 KPNA4O00629 521 aaPredicted RBP17■□□□□ 0.31
EXOSC3-201ENST00000327304 CDK2AP1O14519 115 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 GNB5O14775 395 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 PRODHO43272 600 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 HCN1O60741 890 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 IGF2P01344 180 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 GRK5P34947 590 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 CXADRP78310 365 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 TOMM34Q15785 309 aaPredicted RBP17■□□□□ 0.31
EXOSC3-201ENST00000327304 TBR1Q16650 682 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 C3orf49Q96BT1 292 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 UBQLN3Q9H347 655 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 HHATLQ9HCP6 504 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 FBXL2Q9UKC9 423 aa17■□□□□ 0.31
EXOSC3-201ENST00000327304 IRGMA1A4Y4 181 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 KDM4EB2RXH2 506 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 SNPHO15079 494 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 CDC40O60508 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 PTP4A3O75365 173 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 ATE1O95260 518 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 NUDT14O95848 222 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 LCKP06239 509 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 SAGP10523 405 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 PNMTP11086 282 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 CCNA2P20248 432 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 PTNP21246 168 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 MST1P26927 711 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 FXYD6P3P58550 94 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 SMARCD3Q6STE5 483 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 FADS6Q8N9I5 356 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 OR2M3Q8NG83 312 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 GPR119Q8TDV5 335 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 TMEM80Q96HE8 168 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 PLEKHA8Q96JA3 519 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 C12orf10Q9HB07 376 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 KLHL1Q9NR64 748 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 CACNA1GO43497 2377 aa16.99■□□□□ 0.31
EXOSC3-201ENST00000327304 PINLYPA6NC86 204 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ANKUB1A6NFN9 424 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 TRIM3O75382 744 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 SNX4O95219 450 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ADORA3P0DMS8 318 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 CNR1P21554 472 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 CBFBQ13951 182 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 KLHL22Q53GT1 634 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 SLC16A12Q6ZSM3 486 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 PLCZ1Q86YW0 608 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ANKK1Q8NFD2 765 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 TMEM41AQ96HV5 264 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 JSRP1Q96MG2 331 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 BAIAP2Q9UQB8 552 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 PCDHGA9Q9Y5G4 932 aaKnown RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ENO4A6NNW6 628 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 BHLHE40O14503 412 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 GABARAPO95166 117 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 SP1P08047 785 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 PGCP20142 388 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 MSX1P28360 303 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 PEX19P40855 299 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 CD97P48960 835 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 TNFSF10P50591 281 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 SUMO3P55854 103 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 CRYZQ08257 329 aaKnown RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ARSKQ6UWY0 536 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ZNF367Q7RTV3 350 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 BCDIN3DQ7Z5W3 292 aaKnown RBP16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 OAFQ86UD1 273 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 LNX2Q8N448 690 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 OR4K17Q8NGC6 315 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ZNF563Q8TA94 476 aa16.98■□□□□ 0.31
EXOSC3-201ENST00000327304 ZFAND2BQ8WV99 257 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms