RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C14orf79Q96F83 325 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.77■□□□□ 0.125e-7■■■■□ 21.5
SMCHD1-201ENST00000320876 DNAJC13O75165 2243 aa15.77■□□□□ 0.12
SMCHD1-201ENST00000320876 K7EQM0 130 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 LGALS14Q8TCE9 139 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 ZFYVE21Q9BQ24 234 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 TUSC2O75896 110 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 SYN1P17600 705 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 GPLD1P80108 840 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 YIPF5Q969M3 257 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 MTCL1Q9Y4B5 1905 aaKnown RBP15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 SEC14L6B5MCN3 397 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 AADACP22760 399 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 ERVFC1P60507 584 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 SEC61A1P61619 476 aaKnown RBP15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 CATR1Q13166 79 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 CAMK2BQ13554 666 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 IL20RBQ6UXL0 311 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 HRASLSQ9HDD0 168 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 CHRNA9Q9UGM1 479 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 A6NCN8 305 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 A6NIN4 97 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 RBMXL3Q8N7X1 1067 aaKnown RBP15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 FRMD1Q8N878 549 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 OR4A16Q8NH70 328 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 FAM122AQ96E09 287 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 KCMF1Q9P0J7 381 aa15.77■□□□□ 0.11
SMCHD1-201ENST00000320876 FKRPQ9H9S5 495 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 PCDHGA1Q9Y5H4 931 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 MT-ND4LP03901 98 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 GYPBP06028 91 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SFXN4Q6P4A7 337 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 NLGN4XQ8N0W4 816 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 TSACCQ96A04 125 aaPredicted RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 TPRP12270 2363 aaKnown RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 FOXE1O00358 373 aaPredicted RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 PMS2P2O95744 297 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SBK2P0C263 348 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 GDNFP39905 211 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 TMEM71Q6P5X7 295 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 MRPL10Q7Z7H8 261 aaKnown RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 MROH6A6NGR9 719 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF133P52736 654 aaPredicted RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ACSM1Q08AH1 577 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 FIGLAQ6QHK4 219 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC43A2Q8N370 569 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SEC22CQ9BRL7 303 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 HTR2CP28335 458 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 PGGT1BP53609 377 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 HTR4Q13639 388 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 RPE65Q16518 533 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 MKXQ8IYA7 352 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 RNF113BQ8IZP6 322 aaKnown RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ALOXE3Q9BYJ1 711 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 FTSJ1Q9UET6 329 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNFX1Q9P2E3 1918 aaKnown RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ZNF44P15621 663 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SDC1P18827 310 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 OTX2P32243 289 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 LTB4RQ15722 352 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ADIRFQ15847 76 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 DUSP6Q16828 381 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC41A2Q96JW4 573 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 MAP3K3Q99759 626 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC25A21Q9BQT8 299 aaPredicted RBP15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 ISYNA1Q9NPH2 558 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 FBXL2Q9UKC9 423 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 RPH3ALQ9UNE2 315 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 NENFQ9UMX5 172 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 KLK4Q9Y5K2 254 aa15.76■□□□□ 0.11
SMCHD1-201ENST00000320876 A0A1W2PQU0 124 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 OR1Q1Q15612 314 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SLC14A2Q15849 920 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 BAK1Q16611 211 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 GPR26Q8NDV2 337 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 ARNTLO00327 626 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 TRHRP34981 398 aaPredicted RBP15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 ABHD17BQ5VST6 288 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 ACVR1CQ8NER5 493 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SFXN2Q96NB2 322 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 RNF32Q9H0A6 362 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 HPNP05981 417 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 T-ENOLP0DO92 83 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 GGHQ92820 318 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 PBX4Q9BYU1 374 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SFXN1Q9H9B4 322 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 TAF9BQ9HBM6 251 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 TMEM235A6NFC5 223 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 STC2O76061 302 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 NKAIN3Q8N8D7 197 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 BOCQ9BWV1 1114 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SIM1P81133 766 aaPredicted RBP15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SLX4IPQ5VYV7 408 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SCARB1Q8WTV0 552 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 DHRS4Q9BTZ2 278 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 GALNT9Q9HCQ5 603 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 PTBP1P26599 531 aaKnown RBP eCLIP15.75■□□□□ 0.118e-9■■■■■ 49.7
SMCHD1-201ENST00000320876 KLHDC8BQ8IXV7 354 aa15.75■□□□□ 0.11
SMCHD1-201ENST00000320876 SGPP1Q9BX95 441 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms