RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ADCK1Q86TW2 530 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF680Q8NEM1 530 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 NUP43Q8NFH3 380 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 OR4N2Q8NGD1 307 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 OR1S1Q8NH92 325 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 PTPMT1Q8WUK0 201 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SLC35G5Q96KT7 338 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SERINC2Q96SA4 455 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 NPAS1Q99742 590 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SEMA4CQ9C0C4 833 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 LMAN1LQ9HAT1 526 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 LSM7Q9UK45 103 aaKnown RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 IGLV3-32A0A0A0MS00 114 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 PRSS38A1L453 326 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TSPAN2O60636 221 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF254O75437 659 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 UBL3O95164 117 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 APOA1P02647 267 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SYPP08247 313 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF888P0CJ79 500 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 RABIFP47224 123 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 IDH2P48735 452 aaKnown RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 OR12D2P58182 307 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 NR0B2Q15466 257 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 CST6Q15828 149 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SLC25A53Q5H9E4 307 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TOR2AQ5JU69 321 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 NLRC3Q7RTR2 1065 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 Q8N402 240 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 OR10S1Q8NGN2 331 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SPPL2AQ8TCT8 520 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 PHYHIPQ92561 330 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 ZFYVE19Q96K21 471 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TMEM246Q9BRR3 403 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 SPRY4Q9C004 299 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 G6PC2Q9NQR9 355 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 A0A0B4J203 849 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 A0A1B0GUH1 482 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 ZFPL1O95159 310 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 ISG15P05161 165 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 HIST1H1CP16403 213 aaKnown RBP7.09□□□□□ -1.28
CNOT4-201ENST00000315544 PSMA1P25786 263 aaKnown RBP7.09□□□□□ -1.28
CNOT4-201ENST00000315544 AVPR1BP47901 424 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 RSPO1Q2MKA7 263 aaPredicted RBP7.09□□□□□ -1.28
CNOT4-201ENST00000315544 ALG11Q2TAA5 492 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 FAM46CQ5VWP2 391 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 FAM198BQ6UWH4 519 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 LYPD4Q6UWN0 246 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 GLDNQ6ZMI3 551 aaPredicted RBP7.09□□□□□ -1.28
CNOT4-201ENST00000315544 RTN4RL2Q86UN3 420 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF721Q8TF20 911 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 AIF1LQ9BQI0 150 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 SLC19A3Q9BZV2 496 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 MCUBQ9NWR8 336 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 CA14Q9ULX7 337 aa7.09□□□□□ -1.28
CNOT4-201ENST00000315544 TRAV8-7A0A075B6U6 113 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 C2orf92A0A1B0GVN3 265 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 OR52A4PA6NMU1 304 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 IDSB3KWA1 339 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 F8VVB4 439 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 F8VWA3 439 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF354AO60765 605 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ADH1BP00325 375 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 AK1P00568 194 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 IL5P05113 134 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CELA2BP08218 269 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ST8SIA6P61647 398 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 HSPB3Q12988 150 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 FCN2Q15485 313 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SLC35D3Q5M8T2 416 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 DCST2Q5T1A1 773 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 THOC7Q6I9Y2 204 aaKnown RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CPOQ8IVL8 374 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 GALNT12Q8IXK2 581 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CMTM4Q8IZR5 234 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 OR5W2Q8NH69 310 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SLC9A6Q92581 669 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SAMD8Q96LT4 415 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 NUDT16L1Q9BRJ7 211 aaKnown RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 APOOQ9BUR5 198 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ALG8Q9BVK2 526 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SEMA3GQ9NS98 782 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 TVP23BQ9NYZ1 205 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 KLHL9Q9P2J3 617 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CAMK2AQ9UQM7 478 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SLC35A3Q9Y2D2 325 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 HS3ST3A1Q9Y663 406 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CEP290O15078 2479 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 TBC1D3EA0A087X179 549 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 PNMA8CA0A1B0GUJ8 204 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 AIPO00170 330 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 IFNA14P01570 189 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 TCRBP04435 133 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 NMBP08949 121 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 PEPDP12955 493 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ADCYAP1P18509 176 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SLC37A1P57057 533 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms