RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SERGEFQ9UGK8 458 aa12.36□□□□□ -0.43
SKA3-202ENST00000314759 C19orf53Q9UNZ5 99 aaPredicted RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 MRPS23Q9Y3D9 190 aaKnown RBP12.36□□□□□ -0.43
SKA3-202ENST00000314759 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ADAM11O75078 769 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 PLATP00750 562 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 CEACAM5P06731 702 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 PTHLHP12272 177 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 HIST1H1CP16403 213 aaKnown RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 EDNRAP25101 427 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 DPP4P27487 766 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 CLDN12P56749 244 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ACTA2P62736 377 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ACTG2P63267 376 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 DHODHQ02127 395 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 OC90Q02509 493 aaPredicted RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 ETFDHQ16134 617 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ELFN2Q5R3F8 820 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 RPL22L1Q6P5R6 122 aaKnown RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 GLDNQ6ZMI3 551 aaPredicted RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 FCRLAQ7L513 359 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 PAQR7Q86WK9 346 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 COX18Q8N8Q8 333 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 BVESQ8NE79 360 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 OR4E2Q8NGC2 313 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ZCCHC10Q8TBK6 192 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ZNRF4Q8WWF5 429 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ZNF69Q9UC07 566 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ICAM5Q9UMF0 924 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 COPS3Q9UNS2 423 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 CA5BQ9Y2D0 317 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 PRR19A6NJB7 356 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 SUSD5O60279 629 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 IFNGP01579 166 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 FGF2P09038 288 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 EXOSC6Q5RKV6 272 aaKnown RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 ARHGAP11AQ6P4F7 1023 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ZNF613Q6PF04 617 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 USP53Q70EK8 1073 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 ZAR1Q86SH2 424 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 SAMD14Q8IZD0 417 aaPredicted RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 PTCHD1Q96NR3 888 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 CNN2Q99439 309 aaKnown RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 AKAP7Q9P0M2 348 aaPredicted RBP12.35□□□□□ -0.43
SKA3-202ENST00000314759 KLHL9Q9P2J3 617 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 SERTAD3Q9UJW9 196 aa12.35□□□□□ -0.43
SKA3-202ENST00000314759 A0A0B4J2E0 115 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 A0A1B0GX12 115 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ACOD1A6NK06 481 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 AIPO00170 330 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ARPC5O15511 151 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 KRT33AO76009 404 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 GNRH1P01148 92 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 SLC6A6P31641 620 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PTH2RP49190 550 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 SLC35F2Q8IXU6 374 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ZNF433Q8N7K0 673 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 DPYSL5Q9BPU6 564 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 C2orf42Q9NWW7 574 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 CHRNA9Q9UGM1 479 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PCDHGA5Q9Y5G8 931 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 UNC80Q8N2C7 3258 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 A0A1B0GWA3 101 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 NAP1L6A6NFF2 107 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 IDSB3KWA1 339 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ZNF879B4DU55 563 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 ITGA10O75578 1167 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 SIX6O95475 246 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 APOC3P02656 99 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 LINC00303Q3SY05 128 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 FBXO42Q6P3S6 717 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 FCAMRQ8WWV6 532 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 OR1F2PQ96R84 312 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 DUSP22Q9NRW4 184 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PFDN2Q9UHV9 154 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 GXYLT2A0PJZ3 443 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 LDB3O75112 727 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 CD1AP06126 327 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 CPN1P15169 458 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 IFNGR1P15260 489 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 AP3S2P59780 193 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 PPP2CBP62714 309 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms