RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ZNF587Q96SQ5 575 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-201ENST00000296043 C5AR2Q9P296 337 aa11.01□□□□□ -0.65
SHROOM3-201ENST00000296043 FZD1Q9UP38 647 aa11.01□□□□□ -0.65
SHROOM3-201ENST00000296043 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
SHROOM3-201ENST00000296043 LGI1O95970 557 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ACP2P11117 423 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 P2RX1P51575 399 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 DSC1Q08554 894 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PTDSS2Q9BVG9 487 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ARV1Q9H2C2 271 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 H2AFB1P0C5Y9 115 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 FDXRP22570 491 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 TMEM163Q8TC26 289 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 G6PC3Q9BUM1 346 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 MED9Q9NWA0 146 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CLEC2DQ9UHP7 191 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 LIPT1Q9Y234 373 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 B4DXG7 233 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 UBE2MP61081 183 aaKnown RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 LCN6P62502 163 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PCK2Q16822 640 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 OR6F1Q8NGZ6 308 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 C1GALT1Q9NS00 363 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 MMP24Q9Y5R2 645 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 AKAP11Q9UKA4 1901 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CHEK1O14757 476 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PMS2P2O95744 297 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CTXN1P60606 82 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 HOXC5Q00444 222 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CRHR2Q13324 411 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CREB3L4Q8TEY5 395 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 ADAM29Q9UKF5 820 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 OR10J4P0C629 311 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 THBS2P35442 1172 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 RNLSQ5VYX0 342 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC46A3Q7Z3Q1 461 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 TEPSINQ96N21 525 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 DUSP22Q9NRW4 184 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 MARCH4Q9P2E8 410 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF281Q9Y2X9 895 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 TRBV4-1A0A0J9YWV2 114 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 CNMDO75829 334 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 GABARAPO95166 117 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF43P17038 809 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ACHEP22303 614 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 DHPSP49366 369 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 TREML2Q5T2D2 321 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 OR51S1Q8NGJ8 323 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 EGLN3Q9H6Z9 239 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 NRIP3Q9NQ35 241 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 GPR37L1O60883 481 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 FAM163BP0C2L3 166 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 AADACP22760 399 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 GCNT2Q8N0V5 402 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 BLNKQ8WV28 456 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 SPATA6Q9NWH7 488 aaPredicted RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 PRAMEF27A3QJZ7 478 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 FAM183AA6NL82 134 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PRAMEF9Q5VWM5 478 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PRSS45Q7RTY3 260 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 HUS1BQ8NHY5 278 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 WDR81Q562E7 1941 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 MROH2AA6NES4 1674 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 MMP3P08254 477 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 DGCR2P98153 550 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PLK5Q496M5 336 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PHLDA2Q53GA4 152 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 TMEM225Q6GV28 225 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 NRSN1Q8IZ57 195 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 OR13C5Q8NGS8 318 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 OR14L1PQ8NHC6 308 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 PLK3Q9H4B4 646 aa11□□□□□ -0.65
SHROOM3-201ENST00000296043 ZCCHC11Q5TAX3 1644 aaKnown RBP11□□□□□ -0.65
SHROOM3-201ENST00000296043 FAM208AQ9UK61 1670 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 TRABD2BA6NFA1 517 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 NUDT21O43809 227 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ARSAP15289 507 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 DPEP1P16444 411 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 OR7A5Q15622 319 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 CDCA5Q96FF9 252 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 C1orf198Q9H425 327 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 GPR25O00155 361 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 HMGCLP35914 325 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 AADACL3Q5VUY0 350 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SIX4Q9UIU6 781 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 OR5H14A6NHG9 310 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 XCR1P46094 333 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 GLO1Q04760 184 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 PODNL1Q6PEZ8 512 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 WWTR1Q9GZV5 400 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 UBQLN4Q9NRR5 601 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 NUMBLQ9Y6R0 609 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms