RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 JAM3Q9BX67 310 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 FKRPQ9H9S5 495 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 ERGIC3Q9Y282 383 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 GPR52Q9Y2T5 361 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 SLC6A5Q9Y345 797 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 ATMQ13315 3056 aa13.95□□□□□ -0.18
COPS3-201ENST00000268717 RIIAD1A6NNX1 92 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 K7ENP7 123 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 EFSO43281 561 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 NUDT14O95848 222 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 CH25HO95992 272 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 HPP00738 406 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 MT-ATP6P00846 226 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 LCKP06239 509 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 ASAH2BP0C7U1 165 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 HK1P19367 917 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 CHAF1BQ13112 559 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 INO80CQ6PI98 192 aaPredicted RBP13.94□□□□□ -0.18
COPS3-201ENST00000268717 CXXC5Q7LFL8 322 aaKnown RBP13.94□□□□□ -0.18
COPS3-201ENST00000268717 BCDIN3DQ7Z5W3 292 aaKnown RBP13.94□□□□□ -0.18
COPS3-201ENST00000268717 OR52I1Q8NGK6 324 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 NKD1Q969G9 470 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 LGALS12Q96DT0 336 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
COPS3-201ENST00000268717 MND1Q9BWT6 205 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 ENKD1Q9H0I2 346 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 HINT3Q9NQE9 182 aaKnown RBP13.94□□□□□ -0.18
COPS3-201ENST00000268717 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 IL20RAQ9UHF4 553 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 KLHL21Q9UJP4 597 aa13.94□□□□□ -0.18
COPS3-201ENST00000268717 TRAV36DV7A0A075B6V5 113 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 TERTO14746 1132 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 GNB5O14775 395 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NPIPB7O75200 414 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 ITGA10O75578 1167 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 PTHP01270 115 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 ZNF3P17036 446 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 PTGDSP41222 190 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 SRSF6Q13247 344 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 TOMM34Q15785 309 aaPredicted RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 TIGD6Q17RP2 521 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 SLC25A53Q5H9E4 307 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 SLC16A12Q6ZSM3 486 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 VASH2Q86V25 355 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NLGN4YQ8NFZ3 816 aaPredicted RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 ZNF524Q96C55 264 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 RNFT2Q96EX2 444 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 FRMD6Q96NE9 622 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NRIP3Q9NQ35 241 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NANSQ9NR45 359 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 H2AFY2Q9P0M6 372 aaPredicted RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 EXOGQ9Y2C4 368 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 LSM2Q9Y333 95 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 EXOSC1Q9Y3B2 195 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 EXPH5Q8NEV8 1989 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 TMEM129A0AVI4 362 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 SLC22A31A6NKX4 558 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 A8MVM7 634 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 IMPA2O14732 288 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 RAD1O60671 282 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 SLC25A12O75746 678 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 CCNA2P20248 432 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 PAICSP22234 425 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 UQCRC1P31930 480 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 APOBEC1P41238 236 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 LSAMPQ13449 338 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NIPAL3Q6P499 406 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 P2RY8Q86VZ1 359 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 CPOQ8IVL8 374 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 OR10G3Q8NGC4 313 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 KLHDC3Q9BQ90 382 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 TAPBPLQ9BX59 468 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 NAA50Q9GZZ1 169 aaKnown RBP13.93□□□□□ -0.18
COPS3-201ENST00000268717 METTL7AQ9H8H3 244 aa13.93□□□□□ -0.18
COPS3-201ENST00000268717 TMED7-TICAM2A0A0A6YYA0 188 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 PRR23D1E9PI22 279 aaPredicted RBP13.92□□□□□ -0.18
COPS3-201ENST00000268717 M0R082 166 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 SLC2A10O95528 541 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 PPP1R3DO95685 299 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 ADRA2AP08913 450 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 PRR23D2P0DMB1 279 aaPredicted RBP13.92□□□□□ -0.18
COPS3-201ENST00000268717 MYL12AP19105 171 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 TGFBR2P37173 567 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 SSR4P51571 173 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 MLLT10P55197 1068 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 MLF1P58340 268 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 CTF1Q16619 201 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 ZNF362Q5T0B9 420 aaPredicted RBP13.92□□□□□ -0.18
COPS3-201ENST00000268717 MEPCEQ7L2J0 689 aaKnown RBP13.92□□□□□ -0.18
COPS3-201ENST00000268717 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 NANOGP1Q8N7R0 232 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 OR5M3Q8NGP4 307 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 NTNG2Q96CW9 530 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 ZNF160Q9HCG1 818 aa13.92□□□□□ -0.18
COPS3-201ENST00000268717 CHCHD3Q9NX63 227 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms