RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 GPR75O95800 540 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 CENPAP49450 140 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 TSPAN5P62079 268 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 BTG2P78543 158 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 STX4Q12846 297 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 PON3Q15166 354 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 ESCO2Q56NI9 601 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 NHLRC1Q6VVB1 395 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 ZNF767PQ75MW2 155 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 GPALPP1Q8IXQ4 340 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 CDRT4Q8N9R6 151 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 C1orf216Q8TAB5 229 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 CNN2Q99439 309 aaKnown RBP8.38□□□□□ -1.07
MSH4-201ENST00000263187 KLHDC3Q9BQ90 382 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 C20orf85Q9H1P6 137 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 LIN7BQ9HAP6 207 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 GLTPQ9NZD2 209 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 OR10H1Q9Y4A9 318 aa8.38□□□□□ -1.07
MSH4-201ENST00000263187 TMEM72A0PK05 275 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 ADH1BP00325 375 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SRMP19623 302 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 MAOBP27338 520 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 RPS11P62280 158 aaKnown RBP eCLIP8.37□□□□□ -1.07
MSH4-201ENST00000263187 SNTA1Q13424 505 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CDK5R1Q15078 307 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CEBPEQ15744 281 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PRICKLE4Q2TBC4 344 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 WDR45BQ5MNZ6 344 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PXDC1Q5TGL8 231 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 USP53Q70EK8 1073 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 ABHD13Q7L211 337 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 COMMD7Q86VX2 200 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CSNK1A1LQ8N752 337 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 LRRC20Q8TCA0 184 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 Q96M85 177 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 ZFYVE21Q9BQ24 234 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CA10Q9NS85 328 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 NUBP2Q9Y5Y2 271 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 DMDP11532 3685 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 K7EQS6 105 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 BRINP1O60477 761 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 UBL3O95164 117 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 KLF8O95600 359 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 CBX7O95931 251 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 IFNGP01579 166 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 RAF1P04049 648 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 HOXB2P14652 356 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 POU3F2P20265 443 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 MAOAP21397 527 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SLC2A5P22732 501 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SLC6A6P31641 620 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 AQP2P41181 271 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 BLVRAP53004 296 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 BTG1P62324 171 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PSG6Q00889 435 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CAMK2DQ13557 499 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 RIN1Q13671 783 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 ZMYND11Q15326 602 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 FHL5Q5TD97 284 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 LEG1Q6P5S2 330 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 TMPRSS11FQ6ZWK6 438 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 NLRC3Q7RTR2 1065 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PXKQ7Z7A4 578 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 OR10AC1Q8NH08 325 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 UBL7Q96S82 380 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 MYADMQ96S97 322 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 GFI1Q99684 422 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.37□□□□□ -1.07
MSH4-201ENST00000263187 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 DLL4Q9NR61 685 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 NCDNQ9UBB6 729 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PILRAQ9UKJ1 303 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 IKZF2Q9UKS7 526 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 A0A0B4J2E0 115 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 A0A1B0GX12 115 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 NUPL2O15504 423 aaKnown RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 TRIM3O75382 744 aaPredicted RBP8.37□□□□□ -1.07
MSH4-201ENST00000263187 ZFPL1O95159 310 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 AGR2O95994 175 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 IFNA16P05015 189 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 PBX2P40425 430 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SFRP5Q5T4F7 317 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 FAM198BQ6UWH4 519 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 LIX1LQ8IVB5 337 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 RCBTB1Q8NDN9 531 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 OR8S1Q8NH09 359 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SYNPRQ8TBG9 265 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 NR4A3Q92570 626 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SMIM19Q96E16 107 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 SIPA1Q96FS4 1042 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 LMAN2LQ9H0V9 348 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 KLHDC2Q9Y2U9 406 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 FKBP7Q9Y680 259 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 RTTNQ86VV8 2226 aa8.37□□□□□ -1.07
MSH4-201ENST00000263187 CHURC1-FNTBB4DL54 471 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 DCTN6O00399 190 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms