RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 EDNRAP25101 427 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 NAA10P41227 235 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GZMKP49863 264 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 RPS11P62280 158 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 FAPQ12884 760 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MAB21L1Q13394 359 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ERV3-1Q14264 604 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 CEP78Q5JTW2 689 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MED25Q71SY5 747 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 NUP54Q7Z3B4 507 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 RFLNBQ8N5W9 214 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 C7orf57Q8NEG2 295 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 OR51Q1Q8NH59 317 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GRPEL2Q8TAA5 225 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 HSPA12BQ96MM6 686 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ABHD1Q96SE0 405 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GON7Q9BXV9 100 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 WDR70Q9NW82 654 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 COPZ2Q9P299 210 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 GNG8Q9UK08 70 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 SPATA2Q9UM82 520 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 MOKQ9UQ07 419 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 ADAM18Q9Y3Q7 739 aa20.11■□□□□ 0.81
SMARCD2-201ENST00000225742 CTDSPLO15194 276 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 LANCL1O43813 399 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 IL33O95760 270 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 DHFRP00374 187 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 PAHP00439 452 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 AGFG1P52594 562 aaKnown RBP20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 HCCSP53701 268 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 DBPQ10586 325 aaPredicted RBP20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 TNK1Q13470 666 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 NDUFAF6Q330K2 333 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC6A19Q695T7 634 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 KCTD20Q7Z5Y7 419 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 ATG4DQ86TL0 474 aaPredicted RBP20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 LSRQ86X29 649 aaPredicted RBP20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 NMNAT3Q96T66 252 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 GTPBP2Q9BX10 602 aaKnown RBP20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 DPAGT1Q9H3H5 408 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC2A4RGQ9NR83 387 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 HIF3AQ9Y2N7 669 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 MMACHCQ9Y4U1 282 aa20.1■□□□□ 0.81
SMARCD2-201ENST00000225742 IGKV1D-42A0A075B6H8 117 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 OR6C68A6NDL8 312 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 CHURC1-FNTBB4DL54 471 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 C2CD4DB7Z1M9 353 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ARHGEF9O43307 516 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 GSTZ1O43708 216 aaPredicted RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 TFPIP10646 304 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ATF1P18846 271 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 LCN1P31025 176 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 PPICP45877 212 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 FNTBP49356 437 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 MRPL28Q13084 256 aaKnown RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 HSD17B12Q53GQ0 312 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ASB18Q6ZVZ8 466 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 DNAJC5GQ8N7S2 189 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 OR13C5Q8NGS8 318 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC38A3Q99624 504 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 C12orf10Q9HB07 376 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 MRTO4Q9UKD2 239 aaKnown RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 NUBP2Q9Y5Y2 271 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 TLCD2A6NGC4 264 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 LRRN3E7EW58 273 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 UBL4AP11441 157 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 NME1P15531 152 aaKnown RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ERVK-25P63136 954 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 SRSF5Q13243 272 aaKnown RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 EFR3AQ14156 821 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 NNATQ16517 81 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 NTRK2Q16620 822 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 SYT13Q7L8C5 426 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC35F3Q8IY50 421 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 OR5H6Q8NGV6 325 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ADAMTS14Q8WXS8 1223 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 SLC46A1Q96NT5 459 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 BEX2Q9BXY8 128 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 LRRN3Q9H3W5 708 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 PDE7BQ9NP56 450 aa20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 ZNF275Q9NSD4 429 aaPredicted RBP20.09■□□□□ 0.81
SMARCD2-201ENST00000225742 MYO9BQ13459 2157 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 ZNF217O75362 1048 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 TXNDC12O95881 172 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 CD14P08571 375 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 GRM7Q14831 915 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 CCDC85BQ15834 202 aaPredicted RBP20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 ZNF74Q16587 644 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 SLC36A2Q495M3 483 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 EMC4Q5J8M3 183 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 JAZF1Q86VZ6 243 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 LRRC75AQ8NAA5 344 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 ZSCAN1Q8NBB4 408 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 OR51L1Q8NGJ5 315 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 MRI1Q9BV20 369 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 MRPL39Q9NYK5 338 aaKnown RBP20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 COPS3Q9UNS2 423 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 ZNF281Q9Y2X9 895 aa20.08■□□□□ 0.8
SMARCD2-201ENST00000225742 C7orf66A4D0T2 115 aa20.07■□□□□ 0.8
SMARCD2-201ENST00000225742 C17orf105B2RV13 164 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms