RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zfp442A2AQA0 667 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dlgap4B1AZP2 992 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 4933403O08RikF6UK53 379 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fam196aQ3USH1 422 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 HeltQ7TS99 240 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Katnb1Q8BG40 658 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Duoxa1Q8VE49 341 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pcyt2Q922E4 404 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ndufb2Q9CPU2 105 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rhox3gB9EJQ9 160 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rab6aP35279 208 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Neurog1P70660 244 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Plpp4Q0VBU9 271 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr328Q5NCD3 310 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cd47Q61735 303 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Arf2Q8BSL7 181 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r83Q8R287 306 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sla2Q8R4L0 259 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mrpl37Q921S7 423 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pcbd2Q9CZL5 136 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 OcstampQ9D611 498 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Csnk1dQ9DC28 415 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dkkl1Q9QZL9 230 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lao1B1ARV3 523 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn2r113E9PZA6 856 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zmat3O54836 290 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 TyrP11344 533 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Map2k4P47809 397 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rnf149Q3U2C5 394 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc35a1Q61420 336 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Trappc6aQ78XR0 159 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Kcnmb1Q8CAE3 191 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 TbceQ8CIV8 524 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pbx4Q99NE9 378 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cbll1Q9JIY2 491 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm4858A0A0A6YWS7 318 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1150-ps1A0A1L1STL1 316 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 H60cB1B213 197 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm11239E9Q5Z9 360 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr730E9Q8M3 318 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm11237F2Z3W5 360 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm11238F2Z478 360 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 AipO08915 330 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cer1O55233 272 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lef1P27782 397 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CckbrP56481 453 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lsm5P62322 91 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm428Q3UTE2 360 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ranbp10Q6VN19 620 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp955aQ80XR7 545 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zbtb42Q811H0 420 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Yipf6Q8BR70 236 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Spns2Q91VM4 549 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dcp1aQ91YD3 602 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mrps18bQ99N84 254 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Katnbl1Q9CWJ3 299 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tspan11Q9D1D1 253 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Clec3aQ9EPW4 196 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Adam26aQ9R158 697 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 A0A286YDG0 184 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm10376D3YXI8 184 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pcdh1F7BJK1 1077 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm10375L7N286 184 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hoxc8P09025 242 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 NogP97466 232 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fabp5Q05816 135 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp987Q32P14 633 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hfe2Q7TQ32 420 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1015Q7TR94 312 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zc3h14Q8BJ05 735 aaKnown RBP9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Csnk1g3Q8C4X2 424 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc49a3Q8CE47 516 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Osbpl11Q8CI95 751 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Vmn1r74Q8R290 304 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Osgin1Q8VC10 478 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Smim3Q99PE5 60 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 1700001F09RikQ9DAR5 184 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr957Q9EQB7 311 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fbxo17Q9QZM8 286 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Aloxe3Q9WV07 711 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 RgrQ9Z2B3 291 aa9.52□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm21738J3QP72 227 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dnmt3cP0DOY1 709 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Adcyap1r1P70205 496 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CpeQ00493 476 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tas2r135Q7TQA9 312 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc35f4Q8BZK4 485 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Txnl1Q8CDN6 289 aaKnown RBP9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr272Q8VGA0 319 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 BcorQ8CGN4 1759 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cilp2D3Z7H8 1162 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr288E9Q1P2 318 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 SnrpbP27048 231 aaKnown RBP9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 GdnfP48540 211 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cntnap5bQ0V8T8 1292 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Dusp5Q1HL35 384 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr688Q6W049 321 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1087Q7TR63 313 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 DgkzQ80UP3 929 aa9.51□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fam212bQ80VY2 300 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms