RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C DIF1O13577 133 aa6.86□□□□□ -1.31
PEX12YMR026C YCR015CP25616 317 aa6.86□□□□□ -1.31
PEX12YMR026C MNN1P39106 762 aa6.86□□□□□ -1.31
PEX12YMR026C SHR5P41912 237 aa6.86□□□□□ -1.31
PEX12YMR026C SLU7Q02775 382 aaKnown RBP6.86□□□□□ -1.31
PEX12YMR026C ENB1Q08299 606 aa6.86□□□□□ -1.31
PEX12YMR026C AIM44Q99299 758 aa6.86□□□□□ -1.31
PEX12YMR026C SWM1Q12379 170 aa6.85□□□□□ -1.31
PEX12YMR026C PMA1P05030 918 aaKnown RBP6.84□□□□□ -1.31
PEX12YMR026C SRD1P09007 221 aa6.84□□□□□ -1.31
PEX12YMR026C CAD1P24813 409 aaKnown RBP6.84□□□□□ -1.31
PEX12YMR026C MSS4P38994 779 aa6.84□□□□□ -1.31
PEX12YMR026C SSY5P47002 699 aa6.84□□□□□ -1.31
PEX12YMR026C SNP1Q00916 300 aaPredicted RBP6.84□□□□□ -1.31
PEX12YMR026C PEX19Q07418 342 aa6.84□□□□□ -1.31
PEX12YMR026C TUB3P09734 445 aaKnown RBP6.83□□□□□ -1.32
PEX12YMR026C PFK1P16861 987 aaKnown RBP6.83□□□□□ -1.32
PEX12YMR026C HCM1P25364 564 aa6.83□□□□□ -1.32
PEX12YMR026C YKL222CP35995 705 aa6.83□□□□□ -1.32
PEX12YMR026C PHO23P50947 330 aa6.83□□□□□ -1.32
PEX12YMR026C LAS17Q12446 633 aa6.83□□□□□ -1.32
PEX12YMR026C NOP14Q99207 810 aaKnown RBP6.83□□□□□ -1.32
PEX12YMR026C PZF1P39933 429 aa6.82□□□□□ -1.32
PEX12YMR026C ZIP2P53061 704 aa6.82□□□□□ -1.32
PEX12YMR026C TFB2Q02939 513 aa6.82□□□□□ -1.32
PEX12YMR026C YDR338CQ05497 695 aa6.82□□□□□ -1.32
PEX12YMR026C CRR1Q05790 422 aa6.82□□□□□ -1.32
PEX12YMR026C RAD18P10862 487 aa6.81□□□□□ -1.32
PEX12YMR026C RPN10P38886 268 aaKnown RBP6.81□□□□□ -1.32
PEX12YMR026C SAK1P38990 1142 aa6.81□□□□□ -1.32
PEX12YMR026C VHR1P40522 640 aa6.81□□□□□ -1.32
PEX12YMR026C ASI2P53895 289 aa6.81□□□□□ -1.32
PEX12YMR026C MUS81Q04149 632 aaPredicted RBP6.81□□□□□ -1.32
PEX12YMR026C UTP14Q04500 899 aaKnown RBP6.81□□□□□ -1.32
PEX12YMR026C NTO1Q12311 748 aa6.81□□□□□ -1.32
PEX12YMR026C PRP4P20053 465 aaKnown RBP6.8□□□□□ -1.32
PEX12YMR026C RPL8AP17076 256 aaKnown RBP6.79□□□□□ -1.32
PEX12YMR026C PCL2P25693 308 aa6.79□□□□□ -1.32
PEX12YMR026C HOG1P32485 435 aa6.79□□□□□ -1.32
PEX12YMR026C YEL1P34225 687 aa6.79□□□□□ -1.32
PEX12YMR026C CTF13P35203 478 aa6.79□□□□□ -1.32
PEX12YMR026C YNL193WP53870 558 aa6.79□□□□□ -1.32
PEX12YMR026C DNM1P54861 757 aa6.79□□□□□ -1.32
PEX12YMR026C TRM11Q12463 433 aa6.79□□□□□ -1.32
PEX12YMR026C ERG5P54781 538 aa6.78□□□□□ -1.32
PEX12YMR026C NHX1Q04121 633 aa6.78□□□□□ -1.32
PEX12YMR026C YLR001CQ07895 862 aa6.78□□□□□ -1.32
PEX12YMR026C SFP1P32432 683 aa6.77□□□□□ -1.33
PEX12YMR026C NGG1P32494 702 aa6.77□□□□□ -1.33
PEX12YMR026C DEF1P35732 738 aaKnown RBP6.77□□□□□ -1.33
PEX12YMR026C FPR3P38911 411 aaKnown RBP6.77□□□□□ -1.33
PEX12YMR026C PFA3P42836 336 aa6.77□□□□□ -1.33
PEX12YMR026C DOS2P54858 310 aa6.77□□□□□ -1.33
PEX12YMR026C PKH1Q03407 766 aa6.77□□□□□ -1.33
PEX12YMR026C COG8Q04632 607 aa6.77□□□□□ -1.33
PEX12YMR026C TRP4P07285 380 aaPredicted RBP6.76□□□□□ -1.33
PEX12YMR026C MIH1P23748 554 aa6.76□□□□□ -1.33
PEX12YMR026C TRM2P33753 639 aa6.76□□□□□ -1.33
PEX12YMR026C BRN1P38170 754 aa6.76□□□□□ -1.33
PEX12YMR026C RPP1P38786 293 aa6.76□□□□□ -1.33
PEX12YMR026C YFL052WP43551 465 aa6.76□□□□□ -1.33
PEX12YMR026C BNA2P47125 453 aa6.76□□□□□ -1.33
PEX12YMR026C MTR3P48240 250 aaPredicted RBP6.76□□□□□ -1.33
PEX12YMR026C NPY1P53164 384 aa6.76□□□□□ -1.33
PEX12YMR026C ASM4Q05166 528 aa6.76□□□□□ -1.33
PEX12YMR026C GPR1Q12361 961 aa6.76□□□□□ -1.33
PEX12YMR026C YLR415CO13578 112 aa6.75□□□□□ -1.33
PEX12YMR026C SFL1P20134 766 aa6.75□□□□□ -1.33
PEX12YMR026C PMI40P29952 429 aaKnown RBP6.75□□□□□ -1.33
PEX12YMR026C SPC42P36094 363 aa6.75□□□□□ -1.33
PEX12YMR026C HSL7P38274 827 aa6.75□□□□□ -1.33
PEX12YMR026C BUL1P48524 976 aa6.75□□□□□ -1.33
PEX12YMR026C ATG33Q06485 197 aa6.75□□□□□ -1.33
PEX12YMR026C AIM39Q08223 395 aa6.75□□□□□ -1.33
PEX12YMR026C YLR149CQ99296 730 aa6.75□□□□□ -1.33
PEX12YMR026C Q0142Q9ZZW4 58 aa6.74□□□□□ -1.33
PEX12YMR026C HRR25P29295 494 aaKnown RBP6.73□□□□□ -1.33
PEX12YMR026C EFT1P32324 842 aaKnown RBP6.73□□□□□ -1.33
PEX12YMR026C PCM1P38628 557 aaKnown RBP6.73□□□□□ -1.33
PEX12YMR026C AIM14P53109 570 aa6.73□□□□□ -1.33
PEX12YMR026C MET13P53128 600 aa6.73□□□□□ -1.33
PEX12YMR026C GIN4Q12263 1142 aa6.73□□□□□ -1.33
PEX12YMR026C ADR1P07248 1323 aa6.73□□□□□ -1.33
PEX12YMR026C TUB2P02557 457 aaKnown RBP6.72□□□□□ -1.33
PEX12YMR026C YKR051WP36142 418 aa6.72□□□□□ -1.33
PEX12YMR026C YJR142WP47173 342 aa6.72□□□□□ -1.33
PEX12YMR026C UBC9P50623 157 aaPredicted RBP6.72□□□□□ -1.33
PEX12YMR026C MRPS35P53292 345 aa6.72□□□□□ -1.33
PEX12YMR026C YGR161W-CQ3E744 92 aa6.72□□□□□ -1.33
PEX12YMR026C HMG1P12683 1054 aa6.71□□□□□ -1.34
PEX12YMR026C DOT6P40059 670 aaKnown RBP6.71□□□□□ -1.34
PEX12YMR026C MGS1P40151 587 aa6.71□□□□□ -1.34
PEX12YMR026C FKH2P41813 862 aa6.71□□□□□ -1.34
PEX12YMR026C NRG1Q03125 231 aa6.71□□□□□ -1.34
PEX12YMR026C RPN7Q06103 429 aaKnown RBP6.71□□□□□ -1.34
PEX12YMR026C URN1Q06525 465 aaKnown RBP6.71□□□□□ -1.34
PEX12YMR026C ERG4P25340 473 aa6.7□□□□□ -1.34
PEX12YMR026C KTR4P38131 464 aa6.7□□□□□ -1.34
PEX12YMR026C SDA1P53313 767 aaKnown RBP6.7□□□□□ -1.34
PEX12YMR026C YKR018CP36114 725 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms