RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W RGA2Q06407 1009 aa5.91□□□□□ -1.46
SHE10YGL228W TRP2P00899 507 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W ADE4P04046 510 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W CDC42P19073 191 aa5.9□□□□□ -1.47
SHE10YGL228W AFT1P22149 690 aa5.9□□□□□ -1.47
SHE10YGL228W KIP1P28742 1111 aa5.9□□□□□ -1.47
SHE10YGL228W CBF2P32504 956 aa5.9□□□□□ -1.47
SHE10YGL228W UIP5P36137 443 aa5.9□□□□□ -1.47
SHE10YGL228W TRZ1P36159 838 aaPredicted RBP5.9□□□□□ -1.47
SHE10YGL228W SET5P38890 526 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W EFM4P40516 257 aa5.9□□□□□ -1.47
SHE10YGL228W AIM21P40563 679 aa5.9□□□□□ -1.47
SHE10YGL228W CPR7P47103 393 aa5.9□□□□□ -1.47
SHE10YGL228W APT1P49435 187 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W AZR1P50080 613 aa5.9□□□□□ -1.47
SHE10YGL228W SHE10P53075 577 aa5.9□□□□□ -1.47
SHE10YGL228W PPM1Q04081 328 aa5.9□□□□□ -1.47
SHE10YGL228W UTP5Q04177 643 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W YML082WQ04533 649 aaKnown RBP5.9□□□□□ -1.47
SHE10YGL228W ESC2Q06340 456 aa5.9□□□□□ -1.47
SHE10YGL228W SIL1Q08199 421 aa5.9□□□□□ -1.47
SHE10YGL228W SPT2P06843 333 aaPredicted RBP5.89□□□□□ -1.47
SHE10YGL228W GLN3P18494 730 aa5.89□□□□□ -1.47
SHE10YGL228W SWI3P32591 825 aa5.89□□□□□ -1.47
SHE10YGL228W MMS4P38257 691 aa5.89□□□□□ -1.47
SHE10YGL228W SMC2P38989 1170 aaKnown RBP5.89□□□□□ -1.47
SHE10YGL228W YMR124WP39523 943 aaKnown RBP5.89□□□□□ -1.47
SHE10YGL228W ULI1P43604 169 aa5.89□□□□□ -1.47
SHE10YGL228W ESBP6P53918 673 aa5.89□□□□□ -1.47
SHE10YGL228W MUK1Q02866 612 aa5.89□□□□□ -1.47
SHE10YGL228W SOV1Q04748 898 aa5.89□□□□□ -1.47
SHE10YGL228W IWR1Q07532 353 aaPredicted RBP5.89□□□□□ -1.47
SHE10YGL228W ADE2P21264 571 aaKnown RBP5.88□□□□□ -1.47
SHE10YGL228W DAL2P25335 343 aa5.88□□□□□ -1.47
SHE10YGL228W PRR1P28708 518 aa5.88□□□□□ -1.47
SHE10YGL228W DRE2P36152 348 aa5.88□□□□□ -1.47
SHE10YGL228W PAM1P37304 830 aaKnown RBP5.88□□□□□ -1.47
SHE10YGL228W PTC4P38089 393 aa5.88□□□□□ -1.47
SHE10YGL228W MRX3P38172 270 aa5.88□□□□□ -1.47
SHE10YGL228W DAS1P47005 663 aa5.88□□□□□ -1.47
SHE10YGL228W VPS70P47161 811 aa5.88□□□□□ -1.47
SHE10YGL228W MCM16Q12262 181 aa5.88□□□□□ -1.47
SHE10YGL228W YLR422WQ06409 1932 aa5.88□□□□□ -1.47
SHE10YGL228W ASP3-2P0CX77 362 aa5.88□□□□□ -1.47
SHE10YGL228W ASP3-3P0CX78 362 aa5.88□□□□□ -1.47
SHE10YGL228W ASP3-4P0CX79 362 aa5.88□□□□□ -1.47
SHE10YGL228W ASP3-1P0CZ17 362 aa5.88□□□□□ -1.47
SHE10YGL228W RRT12P25381 491 aa5.88□□□□□ -1.47
SHE10YGL228W SKG6P32900 734 aaPredicted RBP5.88□□□□□ -1.47
SHE10YGL228W LDH1P38139 375 aa5.88□□□□□ -1.47
SHE10YGL228W MCX1P38323 520 aaPredicted RBP5.88□□□□□ -1.47
SHE10YGL228W CAJ1P39101 391 aa5.88□□□□□ -1.47
SHE10YGL228W FTR1P40088 404 aa5.88□□□□□ -1.47
SHE10YGL228W SMC3P47037 1230 aa5.88□□□□□ -1.47
SHE10YGL228W ZAP1P47043 880 aa5.88□□□□□ -1.47
SHE10YGL228W SGM1P47166 707 aa5.88□□□□□ -1.47
SHE10YGL228W BOP3P53958 396 aa5.88□□□□□ -1.47
SHE10YGL228W RPA49Q01080 415 aaPredicted RBP5.88□□□□□ -1.47
SHE10YGL228W DOT1Q04089 582 aaKnown RBP5.88□□□□□ -1.47
SHE10YGL228W OPY2Q06810 360 aa5.88□□□□□ -1.47
SHE10YGL228W YDR524C-BQ3E6R4 66 aa5.88□□□□□ -1.47
SHE10YGL228W CDC33P07260 213 aaKnown RBP5.87□□□□□ -1.47
SHE10YGL228W ERG11P10614 530 aa5.87□□□□□ -1.47
SHE10YGL228W HXT1P32465 570 aa5.87□□□□□ -1.47
SHE10YGL228W YKL050CP35736 922 aa5.87□□□□□ -1.47
SHE10YGL228W EXO5P38289 585 aa5.87□□□□□ -1.47
SHE10YGL228W UBX7P38349 436 aa5.87□□□□□ -1.47
SHE10YGL228W TCD1P38756 429 aa5.87□□□□□ -1.47
SHE10YGL228W HXT8P40886 569 aa5.87□□□□□ -1.47
SHE10YGL228W DIG1Q03063 452 aaKnown RBP5.87□□□□□ -1.47
SHE10YGL228W SNU56Q03782 492 aaKnown RBP5.87□□□□□ -1.47
SHE10YGL228W VAC14Q06708 880 aa5.87□□□□□ -1.47
SHE10YGL228W ABP140Q08641 628 aaKnown RBP5.87□□□□□ -1.47
SHE10YGL228W GIS3Q12418 502 aa5.87□□□□□ -1.47
SHE10YGL228W ECM3Q99252 613 aa5.87□□□□□ -1.47
SHE10YGL228W NAT1P12945 854 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W RNR1P21524 888 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W SCJ1P25303 377 aa5.86□□□□□ -1.47
SHE10YGL228W POT1P27796 417 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SHE10YGL228W RPT1P33299 467 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W TRM2P33753 639 aa5.86□□□□□ -1.47
SHE10YGL228W CSG2P35206 410 aa5.86□□□□□ -1.47
SHE10YGL228W ALD5P40047 520 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W YER186CP40101 306 aa5.86□□□□□ -1.47
SHE10YGL228W SBE2P42223 864 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W LAM5P43560 674 aa5.86□□□□□ -1.47
SHE10YGL228W YNL115CP53925 644 aa5.86□□□□□ -1.47
SHE10YGL228W NGL3Q03210 505 aa5.86□□□□□ -1.47
SHE10YGL228W CWC21Q03375 135 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W SML1Q04964 104 aa5.86□□□□□ -1.47
SHE10YGL228W CDD1Q06549 142 aa5.86□□□□□ -1.47
SHE10YGL228W TSR1Q07381 788 aaKnown RBP5.86□□□□□ -1.47
SHE10YGL228W DAS2Q12084 232 aa5.86□□□□□ -1.47
SHE10YGL228W AI5_BETAQ9ZZX0 354 aa5.86□□□□□ -1.47
SHE10YGL228W GCV2P49095 1034 aa5.85□□□□□ -1.47
SHE10YGL228W ALG11P53954 548 aaKnown RBP5.85□□□□□ -1.47
SHE10YGL228W STE20Q03497 939 aaKnown RBP5.85□□□□□ -1.47
SHE10YGL228W PCD1Q12524 340 aa5.85□□□□□ -1.47
SHE10YGL228W COX11P19516 300 aaKnown RBP5.85□□□□□ -1.47
SHE10YGL228W PAP1P29468 568 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms