RNA–Protein interactions for RNA: YDR067C

OCA6, Transcript of Cytoplasmic protein required for replication of Brome mosaic virus, yeast

Gene OCA6, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OCA6	YDR067C	LRS4	Q04087	347 aa	Known RBP	4.71	□□□□□ -1.66
OCA6	YDR067C	IRC10	Q08118	586 aa		4.71	□□□□□ -1.66
OCA6	YDR067C	YOR131C	Q12486	218 aa		4.71	□□□□□ -1.66
OCA6	YDR067C	YCL002C	P25565	263 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	MTH1	P35198	433 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	CTF13	P35203	478 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	PPS1	P38148	807 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	STU2	P46675	888 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	MRPS35	P53292	345 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	YDR514C	Q04408	483 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	TRM11	Q12463	433 aa		4.7	□□□□□ -1.66
OCA6	YDR067C	PRP4	P20053	465 aa	Known RBP	4.69	□□□□□ -1.66
OCA6	YDR067C	RPP1	P38786	293 aa		4.69	□□□□□ -1.66
OCA6	YDR067C	PZF1	P39933	429 aa		4.69	□□□□□ -1.66
OCA6	YDR067C	PKH1	Q03407	766 aa		4.69	□□□□□ -1.66
OCA6	YDR067C	REH1	Q06709	432 aa		4.69	□□□□□ -1.66
OCA6	YDR067C	YOL098C	Q12496	1037 aa		4.69	□□□□□ -1.66
OCA6	YDR067C	MET3	P08536	511 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	SRP40	P32583	406 aa	Predicted RBP	4.68	□□□□□ -1.66
OCA6	YDR067C	SAK1	P38990	1142 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	ATF1	P40353	525 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	SHR5	P41912	237 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	SSY5	P47002	699 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	LGE1	Q02796	332 aa	Known RBP	4.68	□□□□□ -1.66
OCA6	YDR067C	RSC3	Q06639	885 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	MET7	Q08645	548 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	FRE5	Q08908	694 aa		4.68	□□□□□ -1.66
OCA6	YDR067C	SPC42	P36094	363 aa		4.67	□□□□□ -1.66
OCA6	YDR067C	ELO3	P40319	345 aa		4.67	□□□□□ -1.66
OCA6	YDR067C	FKH2	P41813	862 aa		4.67	□□□□□ -1.66
OCA6	YDR067C	ASI2	P53895	289 aa		4.67	□□□□□ -1.66
OCA6	YDR067C	DLT1	Q04216	342 aa		4.67	□□□□□ -1.66
OCA6	YDR067C	PER1	P25625	357 aa		4.66	□□□□□ -1.66
OCA6	YDR067C	NGG1	P32494	702 aa		4.66	□□□□□ -1.66
OCA6	YDR067C	SET5	P38890	526 aa	Known RBP	4.66	□□□□□ -1.66
OCA6	YDR067C	TIM44	Q01852	431 aa		4.66	□□□□□ -1.66
OCA6	YDR067C	MUS81	Q04149	632 aa	Predicted RBP	4.66	□□□□□ -1.66
OCA6	YDR067C	CAF20	P12962	161 aa	Known RBP	4.65	□□□□□ -1.67
OCA6	YDR067C	YKL091C	P33324	310 aa	Known RBP	4.65	□□□□□ -1.67
OCA6	YDR067C	SPC29	P33419	253 aa		4.65	□□□□□ -1.67
OCA6	YDR067C	SDS3	P40505	327 aa		4.65	□□□□□ -1.67
OCA6	YDR067C	DIF1	O13577	133 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	ERR1	P0CX10	437 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	ERR2	P0CX11	437 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	CHZ1	P40019	153 aa	Predicted RBP	4.64	□□□□□ -1.67
OCA6	YDR067C	PFA3	P42836	336 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	ZDS1	P50111	915 aa	Known RBP	4.64	□□□□□ -1.67
OCA6	YDR067C	MUP1	P50276	574 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	ATP25	Q03153	612 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	ADY4	Q05955	493 aa		4.64	□□□□□ -1.67
OCA6	YDR067C	RLP7	P40693	322 aa	Known RBP	4.63	□□□□□ -1.67
OCA6	YDR067C	ALY2	P47029	1046 aa		4.63	□□□□□ -1.67
OCA6	YDR067C	HSV2	P50079	448 aa	Predicted RBP	4.63	□□□□□ -1.67
OCA6	YDR067C	NRG1	Q03125	231 aa		4.63	□□□□□ -1.67
OCA6	YDR067C	CRR1	Q05790	422 aa		4.63	□□□□□ -1.67
OCA6	YDR067C	THI21	Q08975	551 aa		4.63	□□□□□ -1.67
OCA6	YDR067C	YLR415C	O13578	112 aa		4.62	□□□□□ -1.67
OCA6	YDR067C	GDH3	P39708	457 aa		4.62	□□□□□ -1.67
OCA6	YDR067C	MTR3	P48240	250 aa	Predicted RBP	4.62	□□□□□ -1.67
OCA6	YDR067C	MRH1	Q12117	320 aa	Predicted RBP	4.62	□□□□□ -1.67
OCA6	YDR067C	SUT2	Q12286	268 aa		4.62	□□□□□ -1.67
OCA6	YDR067C	YBR182C-A	Q8TGU6	64 aa		4.62	□□□□□ -1.67
OCA6	YDR067C	TIM23	P32897	222 aa		4.61	□□□□□ -1.67
OCA6	YDR067C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
OCA6	YDR067C	YBR053C	P38235	358 aa		4.61	□□□□□ -1.67
OCA6	YDR067C	HBT1	Q07653	1046 aa	Known RBP	4.61	□□□□□ -1.67
OCA6	YDR067C	PEX2	P32800	271 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	CUE2	P36075	443 aa	Known RBP	4.6	□□□□□ -1.67
OCA6	YDR067C	OCA5	P38738	679 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	YHL017W	P38745	532 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	TY4A-J	P47023	414 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	HXT16	P47185	567 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	AMA1	P50082	593 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	ZIP2	P53061	704 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	RPN4	Q03465	531 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	ASM4	Q05166	528 aa		4.6	□□□□□ -1.67
OCA6	YDR067C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
OCA6	YDR067C	DAS1	P47005	663 aa		4.59	□□□□□ -1.67
OCA6	YDR067C	NUP82	P40368	713 aa		4.58	□□□□□ -1.68
OCA6	YDR067C	YIR042C	P40586	236 aa		4.58	□□□□□ -1.68
OCA6	YDR067C	YJL163C	P46996	555 aa		4.58	□□□□□ -1.68
OCA6	YDR067C	TGL5	Q12043	749 aa		4.58	□□□□□ -1.68
OCA6	YDR067C	SIC1	P38634	284 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	PCL5	P38794	229 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	MAL11	P53048	616 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	YBP2	P53169	641 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	YDR338C	Q05497	695 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	IRC13	Q08630	104 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	GPR1	Q12361	961 aa		4.57	□□□□□ -1.68
OCA6	YDR067C	BNR1	P40450	1375 aa		4.56	□□□□□ -1.68
OCA6	YDR067C	HIS7	P33734	552 aa	Known RBP	4.56	□□□□□ -1.68
OCA6	YDR067C	MTC2	P34246	357 aa		4.56	□□□□□ -1.68
OCA6	YDR067C	TDP1	P38319	544 aa		4.56	□□□□□ -1.68
OCA6	YDR067C	RPN10	P38886	268 aa	Known RBP	4.56	□□□□□ -1.68
OCA6	YDR067C	YFL052W	P43551	465 aa		4.56	□□□□□ -1.68
OCA6	YDR067C	YLR125W	Q12138	136 aa		4.56	□□□□□ -1.68
OCA6	YDR067C	PHO8	P11491	566 aa		4.55	□□□□□ -1.68
OCA6	YDR067C	LAT1	P12695	482 aa	Known RBP	4.55	□□□□□ -1.68
OCA6	YDR067C	GSY1	P23337	708 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms