RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NUDT8Q8WV74 236 aa9.71□□□□□ -0.86
CCDC7-216ENST00000640058 EFCC1Q9HA90 598 aa9.71□□□□□ -0.86
CCDC7-216ENST00000640058 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
CCDC7-216ENST00000640058 XYLBO75191 536 aa9.7□□□□□ -0.86
CCDC7-216ENST00000640058 NAGPAQ9UK23 515 aa9.7□□□□□ -0.86
CCDC7-216ENST00000640058 TIMELESSQ9UNS1 1208 aa9.7□□□□□ -0.86
CCDC7-216ENST00000640058 CPB1P15086 417 aa9.69□□□□□ -0.86
CCDC7-216ENST00000640058 C20orf204Q6ZNR8 217 aa9.69□□□□□ -0.86
CCDC7-216ENST00000640058 DHX32Q7L7V1 743 aaKnown RBP9.69□□□□□ -0.86
CCDC7-216ENST00000640058 KCNMB2Q9Y691 235 aa9.69□□□□□ -0.86
CCDC7-216ENST00000640058 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
CCDC7-216ENST00000640058 ZBTB39O15060 712 aa9.68□□□□□ -0.86
CCDC7-216ENST00000640058 ZAP70P43403 619 aa9.68□□□□□ -0.86
CCDC7-216ENST00000640058 PSAPL1Q6NUJ1 521 aa9.68□□□□□ -0.86
CCDC7-216ENST00000640058 JPH1Q9HDC5 661 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-216ENST00000640058 STIM2Q9P246 746 aa9.68□□□□□ -0.86
CCDC7-216ENST00000640058 ZBTB42B2RXF5 422 aa9.67□□□□□ -0.86
CCDC7-216ENST00000640058 COL9A3Q14050 684 aaPredicted RBP9.67□□□□□ -0.86
CCDC7-216ENST00000640058 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
CCDC7-216ENST00000640058 HFE2Q6ZVN8 426 aa9.67□□□□□ -0.86
CCDC7-216ENST00000640058 FAM35AQ86V20 835 aa9.67□□□□□ -0.86
CCDC7-216ENST00000640058 GPR152Q8TDT2 470 aa9.67□□□□□ -0.86
CCDC7-216ENST00000640058 LILRB5O75023 590 aa9.66□□□□□ -0.86
CCDC7-216ENST00000640058 MAP3K6O95382 1288 aa9.66□□□□□ -0.86
CCDC7-216ENST00000640058 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
CCDC7-216ENST00000640058 ALYREFQ86V81 257 aaKnown RBP9.66□□□□□ -0.86
CCDC7-216ENST00000640058 MSTNO14793 375 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 NID1P14543 1247 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 SSFA2P28290 1259 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 ABTB2Q8N961 1025 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 PRDM6Q9NQX0 595 aa9.65□□□□□ -0.86
CCDC7-216ENST00000640058 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 MMP20O60882 483 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 EGFRP00533 1210 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 IGHA1P01876 353 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 ATCAYQ86WG3 371 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 PIK3R5Q8WYR1 880 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 NSUN5Q96P11 429 aaKnown RBP9.64□□□□□ -0.87
CCDC7-216ENST00000640058 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
CCDC7-216ENST00000640058 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 RGS9O75916 674 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-216ENST00000640058 CHRNA4P43681 627 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 GPLD1P80108 840 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 PLAURQ03405 335 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 MTMR3Q13615 1198 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 TRPM4Q8TD43 1214 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 GTF3C2Q8WUA4 911 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-216ENST00000640058 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
CCDC7-216ENST00000640058 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
CCDC7-216ENST00000640058 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 J3QW42 95 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 PROCP04070 461 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 PSAPP07602 524 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
CCDC7-216ENST00000640058 PRRT3Q5FWE3 981 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
CCDC7-216ENST00000640058 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
CCDC7-216ENST00000640058 ARID4AP29374 1257 aaPredicted RBP9.61□□□□□ -0.87
CCDC7-216ENST00000640058 PCSK7Q16549 785 aa9.61□□□□□ -0.87
CCDC7-216ENST00000640058 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
CCDC7-216ENST00000640058 CD163Q86VB7 1156 aa9.61□□□□□ -0.87
CCDC7-216ENST00000640058 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
CCDC7-216ENST00000640058 MPSTP25325 297 aa9.6□□□□□ -0.87
CCDC7-216ENST00000640058 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
CCDC7-216ENST00000640058 NRLP54845 237 aa9.6□□□□□ -0.87
CCDC7-216ENST00000640058 TRIM28Q13263 835 aaKnown RBP9.6□□□□□ -0.87
CCDC7-216ENST00000640058 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
CCDC7-216ENST00000640058 SMG9Q9H0W8 520 aaKnown RBP9.6□□□□□ -0.87
CCDC7-216ENST00000640058 EDEM1Q92611 657 aa9.59□□□□□ -0.87
CCDC7-216ENST00000640058 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
CCDC7-216ENST00000640058 GRIK4Q16099 956 aa9.58□□□□□ -0.88
CCDC7-216ENST00000640058 DMRTC2Q8IXT2 367 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-216ENST00000640058 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
CCDC7-216ENST00000640058 FNDC3AQ9Y2H6 1198 aaKnown RBP9.58□□□□□ -0.88
CCDC7-216ENST00000640058 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
CCDC7-216ENST00000640058 ABL1P00519 1130 aa9.57□□□□□ -0.88
CCDC7-216ENST00000640058 SIK1P57059 783 aa9.57□□□□□ -0.88
CCDC7-216ENST00000640058 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
CCDC7-216ENST00000640058 NOM1Q5C9Z4 860 aaKnown RBP9.57□□□□□ -0.88
CCDC7-216ENST00000640058 FRRS1LQ9P0K9 344 aa9.57□□□□□ -0.88
CCDC7-216ENST00000640058 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 APBA3O96018 575 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 GHRHP01286 108 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 EIF1AXP47813 144 aaKnown RBP9.56□□□□□ -0.88
CCDC7-216ENST00000640058 ZNF211Q13398 564 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-216ENST00000640058 GRIK5Q16478 980 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 USTQ9Y2C2 406 aa9.56□□□□□ -0.88
CCDC7-216ENST00000640058 A6NHS1 94 aa9.55□□□□□ -0.88
CCDC7-216ENST00000640058 SOX18P35713 384 aa9.55□□□□□ -0.88
CCDC7-216ENST00000640058 AAMPQ13685 434 aa9.55□□□□□ -0.88
CCDC7-216ENST00000640058 COL13A1Q5TAT6 717 aaPredicted RBP9.55□□□□□ -0.88
CCDC7-216ENST00000640058 TTC39BQ5VTQ0 682 aaPredicted RBP9.55□□□□□ -0.88
CCDC7-216ENST00000640058 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
CCDC7-216ENST00000640058 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
CCDC7-216ENST00000640058 BAG6P46379 1132 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms