RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 ATP5JP18859 108 aa22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 COL9A3Q14050 684 aaPredicted RBP22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 ST3GAL1Q11201 340 aa22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 ZNF589Q86UQ0 364 aaPredicted RBP22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 TJP1Q07157 1748 aa22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 SHANK3Q9BYB0 1731 aa22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 GJB2P29033 226 aa22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 ME3Q16798 604 aa22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 SH2B1Q9NRF2 756 aaPredicted RBP22.66■■□□□ 1.22
CROCCP2-206ENST00000639594 PAPPAQ13219 1627 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 LMBR1LQ6UX01 489 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 CNPY2Q9Y2B0 182 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 NDUFB9Q9Y6M9 179 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 TAF6LQ9Y6J9 622 aa22.65■■□□□ 1.22
CROCCP2-206ENST00000639594 H7C1W4 665 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 TOM1O60784 492 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 F13A1P00488 732 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 FOXO4P98177 505 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 DBNDD2Q9BQY9 259 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 TPCN1Q9ULQ1 816 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.21
CROCCP2-206ENST00000639594 JCADQ9P266 1359 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 PSMA5P28066 241 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 TMEM87AQ8NBN3 555 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 A1BGP04217 495 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 NECAB1Q8N987 351 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 BTG4Q9NY30 223 aa22.63■■□□□ 1.21
CROCCP2-206ENST00000639594 CHMP3Q9Y3E7 222 aa22.62■■□□□ 1.21
CROCCP2-206ENST00000639594 COL14A1Q05707 1796 aaKnown RBP22.62■■□□□ 1.21
CROCCP2-206ENST00000639594 TAF5LO75529 589 aa22.62■■□□□ 1.21
CROCCP2-206ENST00000639594 EVA1CP58658 441 aa22.62■■□□□ 1.21
CROCCP2-206ENST00000639594 RNF20Q5VTR2 975 aa22.62■■□□□ 1.21
CROCCP2-206ENST00000639594 SYAP1Q96A49 352 aaPredicted RBP22.61■■□□□ 1.21
CROCCP2-206ENST00000639594 CHGBP05060 677 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 BLOC1S2Q6QNY1 142 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 TCEANC2Q96MN5 208 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 DNAJC2Q99543 621 aaKnown RBP22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 CARD10Q9BWT7 1032 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 MTMR6Q9Y217 621 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 NKX1-1Q15270 411 aaPredicted RBP22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 CWC25Q9NXE8 425 aaPredicted RBP22.6■■□□□ 1.21
CROCCP2-206ENST00000639594 IL2RBP14784 551 aa22.59■■□□□ 1.21
CROCCP2-206ENST00000639594 RPS6KB1P23443 525 aa22.59■■□□□ 1.21
CROCCP2-206ENST00000639594 HAUS7Q99871 368 aa22.59■■□□□ 1.21
CROCCP2-206ENST00000639594 ZNF609O15014 1411 aa22.59■■□□□ 1.21
CROCCP2-206ENST00000639594 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
CROCCP2-206ENST00000639594 TSGA10IPQ3SY00 556 aa22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 USPL1Q5W0Q7 1092 aa22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 ATG9AQ7Z3C6 839 aa22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 PDLIM2Q96JY6 352 aa22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 CCDC9Q9Y3X0 531 aaKnown RBP22.58■■□□□ 1.21
CROCCP2-206ENST00000639594 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 CCDC129Q6ZRS4 1044 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 SEC62Q99442 399 aaKnown RBP22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 TSPY26PQ9H489 355 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 ATP6V1DQ9Y5K8 247 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 TOGARAM1Q9Y4F4 1720 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 LAMA4Q16363 1823 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 RFX7Q2KHR2 1363 aa22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 TOB2Q14106 344 aaPredicted RBP22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 ALDH8A1Q9H2A2 487 aaPredicted RBP22.57■■□□□ 1.2
CROCCP2-206ENST00000639594 TPRNQ4KMQ1 711 aa22.56■■□□□ 1.2
CROCCP2-206ENST00000639594 DDX46Q7L014 1031 aaKnown RBP22.56■■□□□ 1.2
CROCCP2-206ENST00000639594 RNF214Q8ND24 703 aa22.56■■□□□ 1.2
CROCCP2-206ENST00000639594 FIBPO43427 364 aa22.56■■□□□ 1.2
CROCCP2-206ENST00000639594 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
CROCCP2-206ENST00000639594 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 DNM1Q05193 864 aaKnown RBP22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 ANKRD1Q15327 319 aa22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 NEUROD6Q96NK8 337 aa22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 UBE2HP62256 183 aa22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 CCDC191Q8NCU4 936 aa22.55■■□□□ 1.2
CROCCP2-206ENST00000639594 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
CROCCP2-206ENST00000639594 TIMM10P62072 90 aa22.54■■□□□ 1.2
CROCCP2-206ENST00000639594 MCMDC2Q4G0Z9 681 aa22.54■■□□□ 1.2
CROCCP2-206ENST00000639594 ZNF594Q96JF6 807 aaPredicted RBP22.54■■□□□ 1.2
CROCCP2-206ENST00000639594 PHF14O94880 888 aa22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 LARP1BQ659C4 914 aaKnown RBP22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 ZSCAN30Q86W11 494 aa22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 LRRC24Q50LG9 513 aa22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
CROCCP2-206ENST00000639594 CCDC183Q5T5S1 534 aa22.52■■□□□ 1.2
CROCCP2-206ENST00000639594 IL15P40933 162 aaPredicted RBP22.52■■□□□ 1.2
CROCCP2-206ENST00000639594 KRT32Q14532 448 aa22.52■■□□□ 1.2
CROCCP2-206ENST00000639594 GPR108Q9NPR9 543 aa22.52■■□□□ 1.2
CROCCP2-206ENST00000639594 U3KPZ7 1027 aaPredicted RBP22.52■■□□□ 1.2
CROCCP2-206ENST00000639594 STK3Q13188 491 aa22.51■■□□□ 1.19
CROCCP2-206ENST00000639594 NEK1Q96PY6 1258 aa22.51■■□□□ 1.19
CROCCP2-206ENST00000639594 EYA2O00167 538 aa22.5■■□□□ 1.19
CROCCP2-206ENST00000639594 GOLIM4O00461 696 aa22.5■■□□□ 1.19
CROCCP2-206ENST00000639594 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms