RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
TARDBP-230ENST00000639083 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-230ENST00000639083 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 UBN2Q6ZU65 1347 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 HIP1O00291 1037 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-230ENST00000639083 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
TARDBP-230ENST00000639083 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
TARDBP-230ENST00000639083 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
TARDBP-230ENST00000639083 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 A0A1B0GUL7 405 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 KCNQ4P56696 695 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 HAUS7Q99871 368 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 GREM2Q9H772 168 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-230ENST00000639083 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
TARDBP-230ENST00000639083 ITGA6P23229 1130 aa13.02□□□□□ -0.32
TARDBP-230ENST00000639083 CTSWP56202 376 aa13.02□□□□□ -0.32
TARDBP-230ENST00000639083 FAM177BA6PVY3 158 aa13.02□□□□□ -0.33
TARDBP-230ENST00000639083 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
TARDBP-230ENST00000639083 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
TARDBP-230ENST00000639083 FAM182BQ5T319 152 aa13.02□□□□□ -0.33
TARDBP-230ENST00000639083 SUSD4Q5VX71 490 aa13.02□□□□□ -0.33
TARDBP-230ENST00000639083 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
TARDBP-230ENST00000639083 PDE8AO60658 829 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
TARDBP-230ENST00000639083 CHGBP05060 677 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 MCM2P49736 904 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
TARDBP-230ENST00000639083 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
TARDBP-230ENST00000639083 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
TARDBP-230ENST00000639083 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
TARDBP-230ENST00000639083 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 MCM4P33991 863 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 HSPA1LP34931 641 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 RAB3GAP1Q15042 981 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
TARDBP-230ENST00000639083 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
TARDBP-230ENST00000639083 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 MAP4K1Q92918 833 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
TARDBP-230ENST00000639083 SNRKQ9NRH2 765 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 NUP98P52948 1817 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 ZNF609O15014 1411 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 GOLIM4O00461 696 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
TARDBP-230ENST00000639083 NECTIN1Q15223 517 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 AKAP2Q9Y2D5 859 aa13□□□□□ -0.33
TARDBP-230ENST00000639083 ADORA1P30542 326 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 KCNJ4P48050 445 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 RBM8AQ9Y5S9 174 aaKnown RBP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 IFIT1P09914 478 aaKnown RBP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 ADCK5Q3MIX3 580 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 XAGE2Q96GT9 111 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 GJD4Q96KN9 370 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
TARDBP-230ENST00000639083 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
TARDBP-230ENST00000639083 CPA1P15085 419 aa12.98□□□□□ -0.33
TARDBP-230ENST00000639083 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
TARDBP-230ENST00000639083 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
TARDBP-230ENST00000639083 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
TARDBP-230ENST00000639083 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
TARDBP-230ENST00000639083 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
TARDBP-230ENST00000639083 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
TARDBP-230ENST00000639083 SSFA2P28290 1259 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 KCNB2Q92953 911 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 TAF5LO75529 589 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-230ENST00000639083 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 TTC14Q96N46 770 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
TARDBP-230ENST00000639083 AFF2P51816 1311 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
TARDBP-230ENST00000639083 CUL4AQ13619 759 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 PKP1Q13835 747 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 MCMDC2Q4G0Z9 681 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 CCDC129Q6ZRS4 1044 aa12.96□□□□□ -0.33
TARDBP-230ENST00000639083 AK7Q96M32 723 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms