RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 NEFMP07197 916 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 CNGB1Q14028 1251 aaPredicted RBP7.27□□□□□ -1.25
PDE4D-229ENST00000638939 HLFQ16534 295 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 OLFM4Q6UX06 510 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 CASP8AP2Q9UKL3 1982 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 NTSR2O95665 410 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
PDE4D-229ENST00000638939 EIF4A1P60842 406 aaKnown RBP7.26□□□□□ -1.25
PDE4D-229ENST00000638939 NEUROD2Q15784 382 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 EAPPQ56P03 285 aaPredicted RBP7.26□□□□□ -1.25
PDE4D-229ENST00000638939 SYNE4Q8N205 404 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 JDP2Q8WYK2 163 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 RPGRQ92834 1020 aaKnown RBP7.26□□□□□ -1.25
PDE4D-229ENST00000638939 AIDAQ96BJ3 306 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 CRAMP1Q96RY5 1269 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 PLEKHF1Q96S99 279 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 ECM29Q5VYK3 1845 aa7.26□□□□□ -1.25
PDE4D-229ENST00000638939 A0A1B0GUL6 1792 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 FAM177BA6PVY3 158 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 PPEF1O14829 653 aaPredicted RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 PDE4AP27815 886 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 LMOD1P29536 600 aaPredicted RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 CTCFP49711 727 aaPredicted RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 VEGFBP49765 207 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 SCNN1DP51172 638 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 EIF6P56537 245 aaKnown RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 NFE2L2Q16236 605 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 GIGYF2Q6Y7W6 1299 aaKnown RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 TTLL7Q6ZT98 887 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 ZNF34Q8IZ26 560 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 CNTROBQ8N137 903 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 VPS33BQ9H267 617 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 FARP1Q9Y4F1 1045 aaPredicted RBP7.25□□□□□ -1.25
PDE4D-229ENST00000638939 PDE4DIPQ5VU43 2346 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 COL4A1P02462 1669 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 MAPK8IP3Q9UPT6 1336 aa7.25□□□□□ -1.25
PDE4D-229ENST00000638939 PPP1R42Q7Z4L9 355 aa7.24□□□□□ -1.25
PDE4D-229ENST00000638939 RBM17Q96I25 401 aaKnown RBP7.24□□□□□ -1.25
PDE4D-229ENST00000638939 MFRPQ9BY79 579 aa7.24□□□□□ -1.25
PDE4D-229ENST00000638939 PNNQ9H307 717 aaKnown RBP7.24□□□□□ -1.25
PDE4D-229ENST00000638939 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
PDE4D-229ENST00000638939 BABAM1Q9NWV8 329 aa7.24□□□□□ -1.25
PDE4D-229ENST00000638939 MIS18AQ9NYP9 233 aa7.24□□□□□ -1.25
PDE4D-229ENST00000638939 TESPA1A2RU30 521 aaPredicted RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 MYL6BP14649 208 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 GPTP24298 496 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 MAP2K1Q02750 393 aaPredicted RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 GOLGA2Q08379 1002 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 SUSD4Q5VX71 490 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 MAP1SQ66K74 1059 aaPredicted RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 USP50Q70EL3 339 aaPredicted RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 RTFDC1Q9BY42 306 aaPredicted RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 DDX21Q9NR30 783 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 PCDHB13Q9Y5F0 798 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 ABCC4O15439 1325 aa7.23□□□□□ -1.25
PDE4D-229ENST00000638939 WDR33Q9C0J8 1336 aaKnown RBP7.23□□□□□ -1.25
PDE4D-229ENST00000638939 ZNF609O15014 1411 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 PPIP5K2O43314 1243 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 HSPA8P11142 646 aaKnown RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 BRPF1P55201 1214 aaPredicted RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 LMOD3Q0VAK6 560 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 PDIA6Q15084 440 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 DEFB115Q30KQ5 88 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 HSP90AB3PQ58FF7 597 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 SLC10A5Q5PT55 438 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 C3orf67Q6ZVT6 689 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 NGEFQ8N5V2 710 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 SUPT20HQ8NEM7 779 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 THUMPD2Q9BTF0 503 aaKnown RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 ADARB2Q9NS39 739 aaKnown RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 GPRC5DQ9NZD1 345 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 TSPYL4Q9UJ04 414 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 ABT1Q9ULW3 272 aaKnown RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 RRP7AQ9Y3A4 280 aaKnown RBP7.22□□□□□ -1.25
PDE4D-229ENST00000638939 GJA3Q9Y6H8 435 aa7.22□□□□□ -1.25
PDE4D-229ENST00000638939 PAPPA2Q9BXP8 1791 aa7.21□□□□□ -1.25
PDE4D-229ENST00000638939 EPS15P42566 896 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 ECE1P42892 770 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 LBX1P52954 281 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 AOC3Q16853 763 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 TMC4Q7Z404 712 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 SLC51AQ86UW1 340 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 HHIPL1Q96JK4 782 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 NLRP3Q96P20 1036 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 UTP14AQ9BVJ6 771 aaKnown RBP7.21□□□□□ -1.26
PDE4D-229ENST00000638939 TMX4Q9H1E5 349 aaPredicted RBP7.21□□□□□ -1.26
PDE4D-229ENST00000638939 PCDHB8Q9UN66 801 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
PDE4D-229ENST00000638939 KIAA2012Q0VF49 1180 aa7.2□□□□□ -1.26
PDE4D-229ENST00000638939 PROSER3Q2NL68 480 aa7.2□□□□□ -1.26
PDE4D-229ENST00000638939 NLRP10Q86W26 655 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms