RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZHX1Q9UKY1 873 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 RNMTO43148 476 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 ZNF75DP51815 510 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 DMTNQ08495 405 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 C16orf45Q96MC5 204 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 DNAJC25Q9H1X3 360 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 PXDNQ92626 1479 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 SLIT1O75093 1534 aa12.91□□□□□ -0.34
SNIP1-204ENST00000638725 LMO7Q8WWI1 1683 aa12.91□□□□□ -0.34
SNIP1-204ENST00000638725 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
SNIP1-204ENST00000638725 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
SNIP1-204ENST00000638725 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.342e-8■■□□□ 14
SNIP1-204ENST00000638725 ZNF165P49910 485 aa12.91□□□□□ -0.34
SNIP1-204ENST00000638725 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-204ENST00000638725 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-204ENST00000638725 TAF5LO75529 589 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 BRF1Q92994 677 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 NFAT5O94916 1531 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 RESTQ13127 1097 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
SNIP1-204ENST00000638725 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 COL15A1P39059 1388 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 JCADQ9P266 1359 aa12.9□□□□□ -0.34
SNIP1-204ENST00000638725 CHGBP05060 677 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 C1orf141Q5JVX7 400 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 UTYO14607 1347 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 IGKV5-2P06315 115 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 NCBP1Q09161 790 aaKnown RBP12.89□□□□□ -0.35
SNIP1-204ENST00000638725 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
SNIP1-204ENST00000638725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.89□□□□□ -0.35
SNIP1-204ENST00000638725 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
SNIP1-204ENST00000638725 HEG1Q9ULI3 1381 aa12.88□□□□□ -0.35
SNIP1-204ENST00000638725 TNNT1P13805 278 aa12.88□□□□□ -0.35
SNIP1-204ENST00000638725 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
SNIP1-204ENST00000638725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
SNIP1-204ENST00000638725 HSP90B1P14625 803 aaKnown RBP12.88□□□□□ -0.35
SNIP1-204ENST00000638725 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
SNIP1-204ENST00000638725 Q6ZUG5 572 aa12.88□□□□□ -0.35
SNIP1-204ENST00000638725 NEK1Q96PY6 1258 aa12.88□□□□□ -0.35
SNIP1-204ENST00000638725 H3BQV1 296 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
SNIP1-204ENST00000638725 EPHA10Q5JZY3 1008 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
SNIP1-204ENST00000638725 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 FOSBP53539 338 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
SNIP1-204ENST00000638725 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 RIC3Q7Z5B4 369 aa12.87□□□□□ -0.35
SNIP1-204ENST00000638725 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
SNIP1-204ENST00000638725 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNIP1-204ENST00000638725 PDIA6Q15084 440 aa12.86□□□□□ -0.35
SNIP1-204ENST00000638725 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
SNIP1-204ENST00000638725 KRT32Q14532 448 aa12.86□□□□□ -0.35
SNIP1-204ENST00000638725 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
SNIP1-204ENST00000638725 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNIP1-204ENST00000638725 DBNLQ9UJU6 430 aaKnown RBP12.86□□□□□ -0.35
SNIP1-204ENST00000638725 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SNIP1-204ENST00000638725 IQCB1Q15051 598 aa12.86□□□□□ -0.35
SNIP1-204ENST00000638725 ZNF609O15014 1411 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 A0A087WWV3 80 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 CYP21A2P08686 494 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 MYL6BP14649 208 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 SCRN1Q12765 414 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 DNAJC2Q99543 621 aaKnown RBP12.85□□□□□ -0.35
SNIP1-204ENST00000638725 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
SNIP1-204ENST00000638725 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
SNIP1-204ENST00000638725 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
SNIP1-204ENST00000638725 MRC1P22897 1456 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 CDC25BP30305 580 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 KCNH5Q8NCM2 988 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 MYD88Q99836 296 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
SNIP1-204ENST00000638725 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 ZSCAN16Q9H4T2 348 aaPredicted RBP12.84□□□□□ -0.35
SNIP1-204ENST00000638725 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms