RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
PAX6-236ENST00000638685 FPGT-TNNI3KV9GXZ4 949 aa12.47□□□□□ -0.41
PAX6-236ENST00000638685 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
PAX6-236ENST00000638685 CHGBP05060 677 aa12.46□□□□□ -0.41
PAX6-236ENST00000638685 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.41
PAX6-236ENST00000638685 SMIM5Q71RC9 77 aa12.46□□□□□ -0.41
PAX6-236ENST00000638685 CNTROBQ8N137 903 aa12.46□□□□□ -0.41
PAX6-236ENST00000638685 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
PAX6-236ENST00000638685 SGSM2O43147 1006 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
PAX6-236ENST00000638685 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
PAX6-236ENST00000638685 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
PAX6-236ENST00000638685 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 USP21Q9UK80 565 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 MYH3P11055 1940 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 HSPA1LP34931 641 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
PAX6-236ENST00000638685 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
PAX6-236ENST00000638685 TIMM10P62072 90 aa12.44□□□□□ -0.42
PAX6-236ENST00000638685 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
PAX6-236ENST00000638685 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
PAX6-236ENST00000638685 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
PAX6-236ENST00000638685 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
PAX6-236ENST00000638685 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
PAX6-236ENST00000638685 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
PAX6-236ENST00000638685 FAM227BQ96M60 508 aa12.43□□□□□ -0.42
PAX6-236ENST00000638685 LSG1Q9H089 658 aaKnown RBP12.43□□□□□ -0.42
PAX6-236ENST00000638685 RREB1Q92766 1687 aa12.43□□□□□ -0.42
PAX6-236ENST00000638685 GPATCH3Q96I76 525 aa12.43□□□□□ -0.42
PAX6-236ENST00000638685 CSF1RP07333 972 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 PTH1RQ03431 593 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 CUL4AQ13619 759 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 FAM177BA6PVY3 158 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 EYA2O00167 538 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 HSPA4P34932 840 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 ZNF34Q8IZ26 560 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 ZGPATQ8N5A5 531 aaKnown RBP12.42□□□□□ -0.42
PAX6-236ENST00000638685 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 TTLL11Q8NHH1 800 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 GREM2Q9H772 168 aa12.42□□□□□ -0.42
PAX6-236ENST00000638685 BTAF1O14981 1849 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 A0A0D9SFI3 127 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 CAMTA2O94983 1202 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 TRMT112Q9UI30 125 aaKnown RBP12.41□□□□□ -0.42
PAX6-236ENST00000638685 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
PAX6-236ENST00000638685 RAD50Q92878 1312 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
PAX6-236ENST00000638685 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 RUFY2Q8WXA3 655 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 NEUROD6Q96NK8 337 aa12.41□□□□□ -0.42
PAX6-236ENST00000638685 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
PAX6-236ENST00000638685 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
PAX6-236ENST00000638685 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
PAX6-236ENST00000638685 ATP5JP18859 108 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.42
PAX6-236ENST00000638685 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
PAX6-236ENST00000638685 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 SUSD4Q5VX71 490 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 ZNF609O15014 1411 aa12.4□□□□□ -0.42
PAX6-236ENST00000638685 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.43
PAX6-236ENST00000638685 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 ITGA6P23229 1130 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 ADORA1P30542 326 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 ZNF589Q86UQ0 364 aaPredicted RBP12.39□□□□□ -0.43
PAX6-236ENST00000638685 AMIGO3Q86WK7 504 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
PAX6-236ENST00000638685 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 AFF2P51816 1311 aa12.39□□□□□ -0.43
PAX6-236ENST00000638685 HCLS1P14317 486 aaPredicted RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 CTSWP56202 376 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 PKP1Q13835 747 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 FSD1Q9BTV5 496 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 COL4A1P02462 1669 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 DDX60Q8IY21 1712 aaKnown RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
PAX6-236ENST00000638685 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 SNX14Q9Y5W7 946 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 TAF1P21675 1872 aa12.38□□□□□ -0.43
PAX6-236ENST00000638685 CIAO1O76071 339 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 CPA1P15085 419 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 ZNF445P59923 1031 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms