RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	NPM3	O75607	178 aa	Known RBP	12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CELF2	O95319	508 aa	Known RBP	12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	MLLT1	Q03111	559 aa	Predicted RBP	12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	SAPCD2	Q86UD0	394 aa		12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	FAM9B	Q8IZU0	186 aa		12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	VPS33B	Q9H267	617 aa		12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ATP6V0A2	Q9Y487	856 aa		12.34	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CXCL9	Q07325	125 aa		12.33	□□□□□ -0.44
CACNA1A-256	ENST00000637981	PARP10	Q53GL7	1025 aa		12.33	□□□□□ -0.44
CACNA1A-256	ENST00000637981	SUPT20H	Q8NEM7	779 aa		12.33	□□□□□ -0.44
CACNA1A-256	ENST00000637981	THUMPD2	Q9BTF0	503 aa	Known RBP	12.33	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ZNRF3	Q9ULT6	936 aa		12.33	□□□□□ -0.44
CACNA1A-256	ENST00000637981	DSG3	P32926	999 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	RGS19	P49795	217 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	GMPS	P49915	693 aa	Predicted RBP	12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	LMOD3	Q0VAK6	560 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	NFE2L2	Q16236	605 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	UTP14A	Q9BVJ6	771 aa	Known RBP	12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ZNF408	Q9H9D4	720 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981		U3KPZ7	1027 aa	Predicted RBP	12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ABCC4	O15439	1325 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ERBB4	Q15303	1308 aa		12.32	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CA12	O43570	354 aa		12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	BRPF1	P55201	1214 aa	Predicted RBP	12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CIAPIN1	Q6FI81	312 aa		12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	DPP8	Q6V1X1	898 aa	Predicted RBP	12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	HHIPL1	Q96JK4	782 aa		12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CFAP44	Q96MT7	982 aa		12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	BCL2L13	Q9BXK5	485 aa		12.31	□□□□□ -0.44
CACNA1A-256	ENST00000637981	RAD17	O75943	681 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	SLC10A5	Q5PT55	438 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	SP8	Q8IXZ3	490 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CCDC146	Q8IYE0	955 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	MPND	Q8N594	471 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ZC3H15	Q8WU90	426 aa	Known RBP	12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	MCOLN1	Q9GZU1	580 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	PGAP2	Q9UHJ9	254 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CDHR2	Q9BYE9	1310 aa		12.3	□□□□□ -0.44
CACNA1A-256	ENST00000637981	ANKRD36C	Q5JPF3	1778 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	BBOX1	O75936	387 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	EIF2S2	P20042	333 aa	Known RBP	12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	TMPO	P42166	694 aa	Known RBP	12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	HIRA	P54198	1017 aa	Predicted RBP	12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	RIPK4	P57078	832 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	KIAA2012	Q0VF49	1180 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	TNIP1	Q15025	636 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CDC37L1	Q7L3B6	337 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	LRP10	Q7Z4F1	713 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	TRPM4	Q8TD43	1214 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	TSPYL4	Q9UJ04	414 aa		12.29	□□□□□ -0.44
CACNA1A-256	ENST00000637981	HCLS1	P14317	486 aa	Predicted RBP	12.28	□□□□□ -0.44
CACNA1A-256	ENST00000637981	PDIA6	Q15084	440 aa		12.28	□□□□□ -0.44
CACNA1A-256	ENST00000637981	DDX46	Q7L014	1031 aa	Known RBP	12.28	□□□□□ -0.44
CACNA1A-256	ENST00000637981	CNOT7	Q9UIV1	285 aa	Known RBP	12.28	□□□□□ -0.44
CACNA1A-256	ENST00000637981	LAMB2	P55268	1798 aa		12.28	□□□□□ -0.44
CACNA1A-256	ENST00000637981	SHTN1	A0MZ66	631 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	YDJC	A8MPS7	323 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	APAF1	O14727	1248 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	ANXA1	P04083	346 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DGKZ	Q13574	1117 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	GRAP	Q13588	217 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	PROSER3	Q2NL68	480 aa		12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	GRAPL	Q8TC17	118 aa	Predicted RBP	12.27	□□□□□ -0.45
CACNA1A-256	ENST00000637981	CASP8AP2	Q9UKL3	1982 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981		H7C1D1	291 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	CALD1	Q05682	793 aa	Known RBP	12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	AIMP1	Q12904	312 aa	Known RBP	12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	NOG	Q13253	232 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	NEUROD2	Q15784	382 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	HSP90AB3P	Q58FF7	597 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	USP48	Q86UV5	1035 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	NLRP10	Q86W26	655 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	MICALL2	Q8IY33	904 aa		12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	TRMT112	Q9UI30	125 aa	Known RBP	12.26	□□□□□ -0.45
CACNA1A-256	ENST00000637981	SH3TC1	Q8TE82	1336 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	HUNK	P57058	714 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	COPS6	Q7L5N1	327 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	NECTIN2	Q92692	538 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	ZIC5	Q96T25	663 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DUOX1	Q9NRD9	1551 aa		12.25	□□□□□ -0.45
CACNA1A-256	ENST00000637981	TCIRG1	Q13488	830 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	CCDC27	Q2M243	656 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DLK2	Q6UY11	383 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	SAMD7	Q7Z3H4	446 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	TMC4	Q7Z404	712 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	XAGE3	Q8WTP9	111 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DPF2	Q92785	391 aa		12.24	□□□□□ -0.45
CACNA1A-256	ENST00000637981	PSMD14	O00487	310 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	WASHC4	Q2M389	1173 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	KRT26	Q7Z3Y9	468 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	ZNF428	Q96B54	188 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	DBNDD1	Q9H9R9	158 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	TAF1	P21675	1872 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	LRRC37A	A6NMS7	1700 aa		12.23	□□□□□ -0.45
CACNA1A-256	ENST00000637981	FAM155A	B1AL88	458 aa	Predicted RBP	12.22	□□□□□ -0.45
CACNA1A-256	ENST00000637981	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.22	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms