RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 GABPB1Q06547 395 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 CCDC186Q7Z3E2 898 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 NECTIN2Q92692 538 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 KCND1Q9NSA2 647 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 HMG20BQ9P0W2 317 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 ANO6Q4KMQ2 910 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 LUZP1Q86V48 1076 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 LEO1Q8WVC0 666 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 QTRT2Q9H974 415 aaKnown RBP23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
CACNA1A-241ENST00000637475 SLC27A2O14975 620 aa23.19■■□□□ 1.3
CACNA1A-241ENST00000637475 RNF20Q5VTR2 975 aa23.19■■□□□ 1.3
CACNA1A-241ENST00000637475 CTNNA3Q9UI47 895 aa23.19■■□□□ 1.3
CACNA1A-241ENST00000637475 PHF8Q9UPP1 1060 aa23.19■■□□□ 1.3
CACNA1A-241ENST00000637475 PHRF1Q9P1Y6 1649 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 RPS6KB1P23443 525 aa23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 RBM6P78332 1123 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 KRT28Q7Z3Y7 464 aa23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 SPATA32Q96LK8 384 aa23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 ZHX1Q9UKY1 873 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-241ENST00000637475 UTYO14607 1347 aa23.17■■□□□ 1.3
CACNA1A-241ENST00000637475 MYH15Q9Y2K3 1946 aa23.17■■□□□ 1.3
CACNA1A-241ENST00000637475 NECAB1Q8N987 351 aa23.17■■□□□ 1.3
CACNA1A-241ENST00000637475 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
CACNA1A-241ENST00000637475 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 TAF3Q5VWG9 929 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 MRFAP1L1Q96HT8 127 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 PI4KAP2A4QPH2 592 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 BLOC1S2Q6QNY1 142 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 PI4KAP1Q8N8J0 262 aa23.16■■□□□ 1.3
CACNA1A-241ENST00000637475 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
CACNA1A-241ENST00000637475 ZBTB7CA1YPR0 619 aa23.15■■□□□ 1.3
CACNA1A-241ENST00000637475 TNNT1P13805 278 aa23.15■■□□□ 1.3
CACNA1A-241ENST00000637475 DDX41Q9UJV9 622 aaKnown RBP23.15■■□□□ 1.3
CACNA1A-241ENST00000637475 USP21Q9UK80 565 aa23.15■■□□□ 1.3
CACNA1A-241ENST00000637475 CTAGE5O15320 804 aa23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 OS9Q13438 667 aaPredicted RBP23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 TOB2Q14106 344 aaPredicted RBP23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 TRIM5Q9C035 493 aa23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 CHPF2Q9P2E5 772 aa23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 MORC2Q9Y6X9 1032 aaPredicted RBP23.14■■□□□ 1.3
CACNA1A-241ENST00000637475 GOLGA6L4A6NEF3 574 aa23.14■■□□□ 1.29
CACNA1A-241ENST00000637475 ZNF165P49910 485 aa23.14■■□□□ 1.29
CACNA1A-241ENST00000637475 RESTQ13127 1097 aa23.13■■□□□ 1.29
CACNA1A-241ENST00000637475 NMIQ13287 307 aaPredicted RBP23.13■■□□□ 1.29
CACNA1A-241ENST00000637475 KRT32Q14532 448 aa23.13■■□□□ 1.29
CACNA1A-241ENST00000637475 ZSCAN16Q9H4T2 348 aaPredicted RBP23.13■■□□□ 1.29
CACNA1A-241ENST00000637475 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 SOX12O15370 315 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 FAM193AP78312 1265 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 LRMPQ12912 555 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 IQCB1Q15051 598 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 CCDC112Q8NEF3 446 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 PGBD1Q96JS3 809 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 FNBP4Q8N3X1 1017 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 CACTINQ8WUQ7 758 aaKnown RBP23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 LTN1O94822 1766 aa23.12■■□□□ 1.29
CACNA1A-241ENST00000637475 CAMK4Q16566 473 aa23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 NYAP1Q6ZVC0 841 aa23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 FAM53CQ9NYF3 392 aa23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 CLIP2Q9UDT6 1046 aa23.11■■□□□ 1.29
CACNA1A-241ENST00000637475 CKAP2LQ8IYA6 745 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 C16orf45Q96MC5 204 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 PSME1Q06323 249 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 ATL3Q6DD88 541 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 GTF3C6Q969F1 213 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 NRBP1Q9UHY1 535 aa23.1■■□□□ 1.29
CACNA1A-241ENST00000637475 SPDYE4A6NLX3 237 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 LRRC8AQ8IWT6 810 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 FAM227BQ96M60 508 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 CFAP45Q9UL16 551 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 NR1I2O75469 434 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 KCNJ4P48050 445 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 AACSQ86V21 672 aa23.09■■□□□ 1.29
CACNA1A-241ENST00000637475 NFAT5O94916 1531 aa23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 KIF2AO00139 706 aaPredicted RBP23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 NLRP6P59044 892 aa23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 FAM173BQ6P4H8 233 aa23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 KSR2Q6VAB6 950 aa23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 LLPHQ9BRT6 129 aaKnown RBP23.08■■□□□ 1.29
CACNA1A-241ENST00000637475 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-241ENST00000637475 STX1AQ16623 288 aa23.07■■□□□ 1.28
CACNA1A-241ENST00000637475 TPRNQ4KMQ1 711 aa23.07■■□□□ 1.28
CACNA1A-241ENST00000637475 CEP135Q66GS9 1140 aa23.07■■□□□ 1.28
CACNA1A-241ENST00000637475 CREBRFQ8IUR6 639 aa23.07■■□□□ 1.28
CACNA1A-241ENST00000637475 ZNF397Q8NF99 534 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms