RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 NSD2O96028 1365 aa4.85□□□□□ -1.63
CHD2-225ENST00000636861 MAP1BP46821 2468 aaKnown RBP4.85□□□□□ -1.63
CHD2-225ENST00000636861 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
CHD2-225ENST00000636861 MYO15AQ9UKN7 3530 aa4.85□□□□□ -1.63
CHD2-225ENST00000636861 USP9XQ93008 2570 aaPredicted RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 CPDO75976 1380 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 LMNB1P20700 586 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 SATB1Q01826 763 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 COL9A2Q14055 689 aaPredicted RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 AMER1Q5JTC6 1135 aaPredicted RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 AEBP1Q8IUX7 1158 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 DEF6Q9H4E7 631 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 TAF1DQ9H5J8 278 aaPredicted RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD2-225ENST00000636861 RAI14Q9P0K7 980 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.84□□□□□ -1.63
CHD2-225ENST00000636861 TLL2Q9Y6L7 1015 aa4.84□□□□□ -1.63
CHD2-225ENST00000636861 C4AP0C0L4 1744 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 C4BP0C0L5 1744 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 DOT1LQ8TEK3 1739 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 ASPMQ8IZT6 3477 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 CTIFO43310 598 aaKnown RBP4.83□□□□□ -1.64
CHD2-225ENST00000636861 DDNO94850 711 aaPredicted RBP4.83□□□□□ -1.64
CHD2-225ENST00000636861 REC8O95072 547 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 CCDC172P0C7W6 258 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 USP8P40818 1118 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 TPM4P67936 248 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 TRDNQ13061 729 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 TERF2Q15554 542 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 MUM1L1Q5H9M0 696 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 ICE2Q659A1 982 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 LRSAM1Q6UWE0 723 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 CNTROBQ8N137 903 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 BANK1Q8NDB2 785 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 CLUAP1Q96AJ1 413 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 RWDD1Q9H446 243 aaPredicted RBP4.83□□□□□ -1.64
CHD2-225ENST00000636861 BCL2L12Q9HB09 334 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
CHD2-225ENST00000636861 MORC2Q9Y6X9 1032 aaPredicted RBP4.83□□□□□ -1.64
CHD2-225ENST00000636861 V9GYY5 206 aaPredicted RBP4.83□□□□□ -1.64
CHD2-225ENST00000636861 ANKRD30BQ9BXX2 1392 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 FAM208BQ5VWN6 2430 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 FER1L6Q2WGJ9 1857 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 SMTNL1A8MU46 457 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 E9PSI1 815 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 NFKBIEO00221 500 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 LIG1P18858 919 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 DDIT3P35638 169 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 GOLGA2Q08379 1002 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 NOLC1Q14978 699 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD2-225ENST00000636861 ATP2B3Q16720 1220 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 ZSCAN23Q3MJ62 389 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 SLFNL1Q499Z3 407 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 CDCA8Q53HL2 280 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 NUTM2GQ5VZR2 741 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 ZNF710Q8N1W2 664 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 ZNF397Q8NF99 534 aaPredicted RBP4.82□□□□□ -1.64
CHD2-225ENST00000636861 GUCD1Q96NT3 240 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 PANK3Q9H999 370 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 CWC22Q9HCG8 908 aaKnown RBP4.82□□□□□ -1.64
CHD2-225ENST00000636861 BSDC1Q9NW68 430 aaPredicted RBP4.82□□□□□ -1.64
CHD2-225ENST00000636861 DDX41Q9UJV9 622 aaKnown RBP4.82□□□□□ -1.64
CHD2-225ENST00000636861 PAXBP1Q9Y5B6 917 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 DMDP11532 3685 aa4.82□□□□□ -1.64
CHD2-225ENST00000636861 USP24Q9UPU5 2620 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 BPTFQ12830 3046 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 ROCK1Q13464 1354 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 ANKRD36BQ8N2N9 1353 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 MINK1Q8N4C8 1332 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 A0A1B0GUL7 405 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 K7ELQ4 463 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 MMP10P09238 476 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 CASQ1P31415 396 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 MAPK8IP2Q13387 824 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 WDR43Q15061 677 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD2-225ENST00000636861 DALRD3Q5D0E6 543 aaKnown RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 L3MBTL2Q969R5 705 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 ZNF692Q9BU19 519 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 CARD10Q9BWT7 1032 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 FAM107BQ9H098 131 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 TSPY26PQ9H489 355 aa4.81□□□□□ -1.64
CHD2-225ENST00000636861 FEZ2Q9UHY8 353 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 CCNL1Q9UK58 526 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 PTPRZ1P23471 2315 aaPredicted RBP4.81□□□□□ -1.64
CHD2-225ENST00000636861 ZFYVE26Q68DK2 2539 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 RPTORQ8N122 1335 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 DNAH12Q6ZR08 3092 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 SPDYE4A6NLX3 237 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 KIF2AO00139 706 aaPredicted RBP4.8□□□□□ -1.64
CHD2-225ENST00000636861 TRAF5O00463 557 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 SOX12O15370 315 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 PLIN1O60240 522 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 TRPA1O75762 1119 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 BAG4O95429 457 aaKnown RBP4.8□□□□□ -1.64
CHD2-225ENST00000636861 IVLP07476 585 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 SLFN14P0C7P3 912 aa4.8□□□□□ -1.64
CHD2-225ENST00000636861 GUCY2CP25092 1073 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms