RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
UPF3B-205ENST00000636792 DDX21Q9NR30 783 aaKnown RBP eCLIP8.6□□□□□ -1.03
UPF3B-205ENST00000636792 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
UPF3B-205ENST00000636792 CCDC87Q9NVE4 849 aa8.6□□□□□ -1.03
UPF3B-205ENST00000636792 HYPKQ9NX55 129 aa8.6□□□□□ -1.03
UPF3B-205ENST00000636792 NUP98P52948 1817 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 PTPRCP08575 1304 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 A0A087WZG4 1122 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 KCNQ3O43525 872 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
UPF3B-205ENST00000636792 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
UPF3B-205ENST00000636792 PTF1AQ7RTS3 328 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
UPF3B-205ENST00000636792 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 C8orf58Q8NAV2 365 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 COL15A1P39059 1388 aa8.59□□□□□ -1.03
UPF3B-205ENST00000636792 CASZ1Q86V15 1759 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 SMAPO00193 183 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 DDX58O95786 925 aaKnown RBP8.58□□□□□ -1.04
UPF3B-205ENST00000636792 GGCXP38435 758 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 PRSS12P56730 875 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 ITPK1Q13572 414 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-205ENST00000636792 ARHGAP45Q92619 1136 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 AK7Q96M32 723 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 PDZRN3Q9UPQ7 1066 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 USP16Q9Y5T5 823 aa8.58□□□□□ -1.04
UPF3B-205ENST00000636792 ATP10DQ9P241 1426 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 IPO8O15397 1037 aaKnown RBP8.57□□□□□ -1.04
UPF3B-205ENST00000636792 MS4A1P11836 297 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 RARSP54136 660 aaKnown RBP8.57□□□□□ -1.04
UPF3B-205ENST00000636792 EIF5P55010 431 aaKnown RBP8.57□□□□□ -1.04
UPF3B-205ENST00000636792 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 TSPYL6Q8N831 410 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 LINC00116Q8NCU8 138 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 LRRC4BQ9NT99 713 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 SMC4Q9NTJ3 1288 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 RCAN3Q9UKA8 241 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
UPF3B-205ENST00000636792 LAMB2P55268 1798 aa8.57□□□□□ -1.04
UPF3B-205ENST00000636792 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
UPF3B-205ENST00000636792 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 SPDYE16A6NNV3 312 aaPredicted RBP8.56□□□□□ -1.04
UPF3B-205ENST00000636792 ERVV-1B6SEH8 477 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 RNF40O75150 1001 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 PDIA6Q15084 440 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
UPF3B-205ENST00000636792 KRT24Q2M2I5 525 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
UPF3B-205ENST00000636792 CLEC4GQ6UXB4 293 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 LRP10Q7Z4F1 713 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
UPF3B-205ENST00000636792 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 NRXN2Q9P2S2 1712 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 ELL2O00472 640 aaPredicted RBP8.55□□□□□ -1.04
UPF3B-205ENST00000636792 GNPATO15228 680 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 EIF2S2P20042 333 aaKnown RBP8.55□□□□□ -1.04
UPF3B-205ENST00000636792 FLIIQ13045 1269 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 SLC15A2Q16348 729 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 SLC16A10Q8TF71 515 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 TATDN2Q93075 761 aa8.55□□□□□ -1.04
UPF3B-205ENST00000636792 API5Q9BZZ5 524 aaKnown RBP8.55□□□□□ -1.04
UPF3B-205ENST00000636792 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
UPF3B-205ENST00000636792 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
UPF3B-205ENST00000636792 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 MYH3P11055 1940 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
UPF3B-205ENST00000636792 A1BGP04217 495 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
UPF3B-205ENST00000636792 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
UPF3B-205ENST00000636792 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
UPF3B-205ENST00000636792 TFCP2L1Q9NZI6 479 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 ABCC4O15439 1325 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
UPF3B-205ENST00000636792 KIF13BQ9NQT8 1826 aa8.52□□□□□ -1.04
UPF3B-205ENST00000636792 ADCY9O60503 1353 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
UPF3B-205ENST00000636792 ZPR1O75312 459 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 MYL6BP14649 208 aa8.52□□□□□ -1.05
UPF3B-205ENST00000636792 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms