RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 LRRC2Q9BYS8 371 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 IKBKGQ9Y6K9 419 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 AFMP43652 599 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 EIF6P56537 245 aaKnown RBP10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 ADGRL1O94910 1474 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 SYCE3A1L190 88 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 ERICH4A6NGS2 130 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 HSP90AA4PQ58FG1 418 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 ARID5AQ03989 594 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 WTAPQ15007 396 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 ERMNQ8TAM6 284 aa10.18□□□□□ -0.78
CHRNA7-219ENST00000636709 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 PI4KAP2A4QPH2 592 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 PI4KAP1Q8N8J0 262 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 BTG4Q9NY30 223 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 B4DLN1 442 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 GCOM1H8Y6P7 765 aaPredicted RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 APBA3O96018 575 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 MYZAPP0CAP1 466 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 CNGA1P29973 690 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 MRPL12P52815 198 aaKnown RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 RBM17Q96I25 401 aaKnown RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 NACA2Q9H009 215 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 KIF5CO60282 957 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 CHPF2Q9P2E5 772 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 CDK13Q14004 1512 aaKnown RBP10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 MAGEB6P1A0A0J9YX57 407 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 RNF34Q969K3 372 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 ALS2CR12Q96Q35 445 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 HAUS7Q99871 368 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 KIF4BQ2VIQ3 1234 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 CRACR2AQ9BSW2 395 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 IMPG2Q9BZV3 1241 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 IVNS1ABPQ9Y6Y0 642 aa10.17□□□□□ -0.78
CHRNA7-219ENST00000636709 ACEP12821 1306 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 LRRC59Q96AG4 307 aaKnown RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 UIMC1Q96RL1 719 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 USO1O60763 962 aaKnown RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 KRT13P13646 458 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 KMT5BQ4FZB7 885 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 MCM9Q9NXL9 1143 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 FSD2A1L4K1 749 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 STAT6P42226 847 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 TCIRG1Q13488 830 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 GSTA5Q7RTV2 222 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 FSIP1Q8NA03 581 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 TFIP11Q9UBB9 837 aaKnown RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 SORBS3O60504 671 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 HMGB1P09429 215 aaKnown RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 FLIIQ13045 1269 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 FAM13AO94988 1023 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 TMCO3Q6UWJ1 677 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 MAGEB6Q8N7X4 407 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 TRIM6Q9C030 488 aaPredicted RBP10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 C6orf50Q9HD87 102 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 ODF2LQ9ULJ1 636 aa10.16□□□□□ -0.78
CHRNA7-219ENST00000636709 CHMP2AO43633 222 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 YEATS4O95619 227 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 KCNA4P22459 653 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 GABPAQ06546 454 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 RPAP2Q8IXW5 612 aaPredicted RBP10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 NCOA7Q8NI08 942 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 TAOK3Q9H2K8 898 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 ANO3Q9BYT9 981 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 TRMT1Q9NXH9 659 aaKnown RBP10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 CCNL1Q9UK58 526 aaPredicted RBP10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 HFM1A2PYH4 1435 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 PLIN2Q99541 437 aa10.15□□□□□ -0.78
CHRNA7-219ENST00000636709 FAM47CQ5HY64 1035 aa10.15□□□□□ -0.79
CHRNA7-219ENST00000636709 CHST3Q7LGC8 479 aa10.15□□□□□ -0.79
CHRNA7-219ENST00000636709 PSMC4P43686 418 aa10.15□□□□□ -0.79
CHRNA7-219ENST00000636709 RASA3Q14644 834 aa10.15□□□□□ -0.79
CHRNA7-219ENST00000636709 LARGE2Q8N3Y3 721 aa10.15□□□□□ -0.79
CHRNA7-219ENST00000636709 NOP56O00567 594 aaKnown RBP10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 DDX39AO00148 427 aaKnown RBP10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 MYCLP12524 364 aaPredicted RBP10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 A0A1W2PRG0 241 aa10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 UFL1O94874 794 aa10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 TCP10Q12799 353 aa10.14□□□□□ -0.79
CHRNA7-219ENST00000636709 COPS6Q7L5N1 327 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms