RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 CTNNA3Q9UI47 895 aa17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.71■□□□□ 0.43
THUMPD1-206ENST00000636554 HOXB7P09629 217 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 BRF1Q92994 677 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 CCDC112Q8NEF3 446 aa17.7■□□□□ 0.42
THUMPD1-206ENST00000636554 LTN1O94822 1766 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 CHGBP05060 677 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 RESTQ13127 1097 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 COL15A1P39059 1388 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 KIF20AO95235 890 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 FOSBP53539 338 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 TEFQ10587 303 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 FEZ1Q99689 392 aa17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
THUMPD1-206ENST00000636554 HIP1O00291 1037 aa17.68■□□□□ 0.42
THUMPD1-206ENST00000636554 NDUFB9Q9Y6M9 179 aa17.68■□□□□ 0.42
THUMPD1-206ENST00000636554 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
THUMPD1-206ENST00000636554 OGFRQ9NZT2 677 aa17.68■□□□□ 0.42
THUMPD1-206ENST00000636554 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 ALDH1L1O75891 902 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 IQCB1Q15051 598 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 V9GYY5 206 aaPredicted RBP17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 CEP135Q66GS9 1140 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 KSR2Q6VAB6 950 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 LRRC8AQ8IWT6 810 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
THUMPD1-206ENST00000636554 JCADQ9P266 1359 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 GRM8O00222 908 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 SYCP1Q15431 976 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 TAF5LO75529 589 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
THUMPD1-206ENST00000636554 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 H3BQV1 296 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 GOLPH3LQ9H4A5 285 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 CDC25BP30305 580 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 Q6ZUG5 572 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 ERCC4Q92889 916 aaPredicted RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 CGNQ9P2M7 1197 aaKnown RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 DDX41Q9UJV9 622 aaKnown RBP17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 PXDNQ92626 1479 aa17.65■□□□□ 0.42
THUMPD1-206ENST00000636554 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 FILIP1Q7Z7B0 1213 aa17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 TRMT1Q9NXH9 659 aaKnown RBP17.64■□□□□ 0.41
THUMPD1-206ENST00000636554 SCRN1Q12765 414 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 LMO7Q8WWI1 1683 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 MYH15Q9Y2K3 1946 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 SKILP12757 684 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 CEBPAP49715 358 aaPredicted RBP17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 SARM1Q6SZW1 724 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 KIF18AQ8NI77 898 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 NEK1Q96PY6 1258 aa17.63■□□□□ 0.41
THUMPD1-206ENST00000636554 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 SLIT1O75093 1534 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 CCDC69A6NI79 296 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 CCZ1BP86790 482 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 CCZ1P86791 482 aaPredicted RBP17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 STX1AQ16623 288 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 KMT5BQ4FZB7 885 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 NYAP1Q6ZVC0 841 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 MRFAP1L1Q96HT8 127 aa17.62■□□□□ 0.41
THUMPD1-206ENST00000636554 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
THUMPD1-206ENST00000636554 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
THUMPD1-206ENST00000636554 DHX40Q8IX18 779 aaKnown RBP17.61■□□□□ 0.41
THUMPD1-206ENST00000636554 CYP21A2P08686 494 aa17.61■□□□□ 0.41
THUMPD1-206ENST00000636554 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
THUMPD1-206ENST00000636554 PTPN14Q15678 1187 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms