RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 A1BGP04217 495 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 MARCKSP29966 332 aaPredicted RBP16.48■□□□□ 0.23
GABRB3-219ENST00000636466 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 MCM5P33992 734 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
GABRB3-219ENST00000636466 CEP131Q9UPN4 1083 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 CYP7A1P22680 504 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 SYCP1Q15431 976 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 USP19O94966 1318 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 IDEP14735 1019 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 DDB1Q16531 1140 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
GABRB3-219ENST00000636466 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
GABRB3-219ENST00000636466 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 UBAP1LF5GYI3 381 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 FAM193AP78312 1265 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 MTERF4Q7Z6M4 381 aaKnown RBP16.46■□□□□ 0.23
GABRB3-219ENST00000636466 TMOD2Q9NZR1 351 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 UBXN4Q92575 508 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
GABRB3-219ENST00000636466 APOBRQ0VD83 1088 aa16.46■□□□□ 0.22
GABRB3-219ENST00000636466 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.22
GABRB3-219ENST00000636466 DCAF5Q96JK2 942 aa16.46■□□□□ 0.22
GABRB3-219ENST00000636466 CENPHQ9H3R5 247 aa16.46■□□□□ 0.22
GABRB3-219ENST00000636466 RFC4P35249 363 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 ZNF594Q96JF6 807 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-219ENST00000636466 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 SNX21Q969T3 373 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-219ENST00000636466 SLC4A4Q9Y6R1 1079 aa16.45■□□□□ 0.22
GABRB3-219ENST00000636466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
GABRB3-219ENST00000636466 ZBTB43O43298 467 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
GABRB3-219ENST00000636466 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
GABRB3-219ENST00000636466 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 TNNT1P13805 278 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 ANAPC15P60006 121 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
GABRB3-219ENST00000636466 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
GABRB3-219ENST00000636466 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
GABRB3-219ENST00000636466 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
GABRB3-219ENST00000636466 IBSPP21815 317 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-219ENST00000636466 WTAPQ15007 396 aa16.43■□□□□ 0.22
GABRB3-219ENST00000636466 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
GABRB3-219ENST00000636466 F13A1P00488 732 aa16.43■□□□□ 0.22
GABRB3-219ENST00000636466 ANKRD18AQ8IVF6 992 aa16.43■□□□□ 0.22
GABRB3-219ENST00000636466 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-219ENST00000636466 PRC1O43663 620 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 AFMP43652 599 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 ZNF622Q969S3 477 aaKnown RBP eCLIP16.42■□□□□ 0.22
GABRB3-219ENST00000636466 ATP10AO60312 1499 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 CCDC24Q8N4L8 307 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 PDCL2Q8N4E4 241 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
GABRB3-219ENST00000636466 METP08581 1390 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 ANO6Q4KMQ2 910 aa16.42■□□□□ 0.22
GABRB3-219ENST00000636466 UBA7P41226 1012 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 UQCRFS1P1P0C7P4 283 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 SYT1P21579 422 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 ZSWIM4Q9H7M6 989 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
GABRB3-219ENST00000636466 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
GABRB3-219ENST00000636466 CTAGE5O15320 804 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 KIF4BQ2VIQ3 1234 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 SYKP43405 635 aa16.4■□□□□ 0.22
GABRB3-219ENST00000636466 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms