RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 KIF22Q14807 665 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 MTFR1Q15390 333 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 CCDC85BQ15834 202 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 ST3GAL2Q16842 350 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 TBC1D10BQ4KMP7 808 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 OTUD7BQ6GQQ9 843 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 CNBD1Q8NA66 436 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 FBXL18Q96ME1 805 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 CNTNAP3BQ96NU0 1288 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 PHOX2BQ99453 314 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 GAS2L1Q99501 681 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 LBHD1Q9BQE6 289 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 CNTNAP3Q9BZ76 1288 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 TMX4Q9H1E5 349 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 ATG3Q9NT62 314 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 RALYQ9UKM9 306 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZNF330Q9Y3S2 320 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 EYSQ5T1H1 3165 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 KDM3BQ7LBC6 1761 aa2.51□□□□□ -2.01
SYNGAP1-215ENST00000636443 SCN7AQ01118 1682 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 KDRP35968 1356 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 NPC1L1Q9UHC9 1359 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 CENPFP49454 3210 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZNF646O15015 1829 aaPredicted RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 MANSC4A6NHS7 340 aaPredicted RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRR33A8MZF0 331 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 TCERG1O14776 1098 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 CYP27B1O15528 508 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 RAD17O75943 681 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 GJB1P08034 283 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 SRGNP10124 158 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 NPR1P16066 1061 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 NF2P35240 595 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 HIRAP54198 1017 aaPredicted RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 FKBP1BP68106 108 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 CRHR2Q13324 411 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 TNIP1Q15025 636 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 SKIV2LQ15477 1246 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 AAK1Q2M2I8 961 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRR5LQ6MZQ0 368 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 MOB2Q70IA6 237 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 NECAB2Q7Z6G3 386 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 IFNL1Q8IU54 200 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 MICALL2Q8IY33 904 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 MICALL1Q8N3F8 863 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 RAET1EQ8TD07 263 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 U2AF1L4Q8WU68 220 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 CFHR5Q9BXR6 569 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 GGA3Q9NZ52 723 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 PGAP2Q9UHJ9 254 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 CNOT7Q9UIV1 285 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 HTTP42858 3142 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 COL4A5P29400 1685 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZNF831Q5JPB2 1677 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 LAMA3Q16787 3333 aa2.5□□□□□ -2.01
SYNGAP1-215ENST00000636443 COL15A1P39059 1388 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 KTN1Q86UP2 1357 aaKnown RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 MAP3K19Q56UN5 1328 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 FAM205AQ6ZU69 1335 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 CDHR2Q9BYE9 1310 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 SHTN1A0MZ66 631 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 WDHD1O75717 1129 aaPredicted RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 IGFBP4P22692 258 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 CXCL9Q07325 125 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 PDE3AQ14432 1141 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 AOC3Q16853 763 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 POTEEQ6S8J3 1075 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 NPM2Q86SE8 214 aaKnown RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZBTB38Q8NAP3 1195 aaPredicted RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 IP6K1Q92551 441 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 PAWRQ96IZ0 340 aaKnown RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 CHAMP1Q96JM3 812 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 TRIM47Q96LD4 638 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 PSMD1Q99460 953 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 KCNH6Q9H252 994 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 TTYH1Q9H313 450 aaPredicted RBP2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 C11orf16Q9NQ32 467 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 NARFQ9UHQ1 456 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 SPG7Q9UQ90 795 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 RIC1Q4ADV7 1423 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZSWIM8A7E2V4 1837 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZDBF2Q9HCK1 2354 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 KIF24Q5T7B8 1368 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 RAB3GAP2Q9H2M9 1393 aa2.49□□□□□ -2.01
SYNGAP1-215ENST00000636443 MUC3AQ02505 3323 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 MED19A0JLT2 244 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 PRAMEF22A3QJZ6 481 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 IGF2BP3O00425 579 aaKnown RBP eCLIP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ZIC2O95409 532 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 SGPL1O95470 568 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 GTF2E1P29083 439 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 ALDH1B1P30837 517 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 GRK4P32298 578 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 KCNQ1P51787 676 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 PTPN5P54829 565 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 EIF5P55010 431 aaKnown RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 INHBEP58166 350 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 TAF1CQ15572 869 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 KIF4BQ2VIQ3 1234 aa2.48□□□□□ -2.01
SYNGAP1-215ENST00000636443 NBPF6Q5VWK0 638 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms