RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 UBA7P41226 1012 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 MAP3K11Q16584 847 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 TDRD12Q587J7 1177 aaKnown RBP7.25□□□□□ -1.25
GABRB3-218ENST00000635994 ZNF804AQ7Z570 1209 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 CCDC77Q9BR77 488 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 C6orf50Q9HD87 102 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 TMOD4Q9NZQ9 345 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 PARP3Q9Y6F1 533 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 TSPY2A6NKD2 308 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 SFPQP23246 707 aaKnown RBP eCLIP7.25□□□□□ -1.25
GABRB3-218ENST00000635994 ARID4AP29374 1257 aaPredicted RBP7.25□□□□□ -1.25
GABRB3-218ENST00000635994 SLC8A3P57103 927 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 RNF214Q8ND24 703 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 TTC21BQ7Z4L5 1316 aa7.25□□□□□ -1.25
GABRB3-218ENST00000635994 K7ELQ4 463 aaPredicted RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 ZWINTO95229 277 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 MTIF2P46199 727 aaKnown RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 TAF3Q5VWG9 929 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 UBXN4Q92575 508 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 C19orf44Q9H6X5 657 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NOB1Q9ULX3 412 aaKnown RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NOD1Q9Y239 953 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 CEP83Q9Y592 693 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NPHP3Q7Z494 1330 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NEMFO60524 1076 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 DKC1O60832 514 aaKnown RBP eCLIP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 ZFYP08048 801 aaPredicted RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 LIG1P18858 919 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 MPRIPQ6WCQ1 1025 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 KRT28Q7Z3Y7 464 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 LRRC59Q96AG4 307 aaKnown RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 PUF60Q9UHX1 559 aaKnown RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 TCERG1LQ5VWI1 586 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 IQCGQ9H095 443 aaKnown RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 NOS1P29475 1434 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 CAVIN2O95810 425 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 C8orf37Q96NL8 207 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 SETDB2Q96T68 719 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 CCDC113Q9H0I3 377 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 CWC25Q9NXE8 425 aaPredicted RBP7.24□□□□□ -1.25
GABRB3-218ENST00000635994 GLI2P10070 1586 aa7.24□□□□□ -1.25
GABRB3-218ENST00000635994 MLH3Q9UHC1 1453 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 TRAK2O60296 914 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 KCNA6P17658 529 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 SPECC1Q5M775 1068 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 MYD88Q99836 296 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 PDZRN3Q9UPQ7 1066 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 MAP4K4O95819 1239 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 KRT23Q9C075 422 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 ZMYND15Q9H091 742 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CNNM2Q9H8M5 875 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 FAM114A2Q9NRY5 505 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CCDC171Q6TFL3 1326 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 NPHP4O75161 1426 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 PREX2Q70Z35 1606 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 SPAG1Q07617 926 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 STMN4Q9H169 189 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 STK32BQ9NY57 414 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CKAP4Q07065 602 aaKnown RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CWC27Q6UX04 472 aaKnown RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CERS3Q8IU89 383 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CCDC155Q8N6L0 562 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 GPHNQ9NQX3 736 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 RASAL2Q9UJF2 1139 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 TCOF1Q13428 1488 aaKnown RBP7.23□□□□□ -1.25
GABRB3-218ENST00000635994 ABCC1P33527 1531 aa7.23□□□□□ -1.25
GABRB3-218ENST00000635994 KIAA0753Q2KHM9 967 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 MFSD6Q6ZSS7 791 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 SLC5A4Q9NY91 659 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ANAPC4Q9UJX5 808 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 SAMD9LQ8IVG5 1584 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 TOP1P11387 765 aaKnown RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 IDEP14735 1019 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ARL1P40616 181 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 CHD1LQ86WJ1 897 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 HACE1Q8IYU2 909 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 PLCD3Q8N3E9 789 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 OTUD6BQ8N6M0 293 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 CACYBPQ9HB71 228 aaKnown RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 HMG20BQ9P0W2 317 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ODF2LQ9ULJ1 636 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 MAST1Q9Y2H9 1570 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 IARSP41252 1262 aaKnown RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 GRM1Q13255 1194 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 LDHAL6AQ6ZMR3 332 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 LMBR1Q8WVP7 490 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 DNAAF4Q8WXU2 420 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 PSMD1Q99460 953 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 TCHPQ9BT92 498 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 ARHGEF5Q12774 1597 aa7.22□□□□□ -1.25
GABRB3-218ENST00000635994 RIOK3O14730 519 aaKnown RBP7.22□□□□□ -1.25
GABRB3-218ENST00000635994 CALM1P0DP23 149 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms