RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 PDCP20941 246 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
PTBP1-221ENST00000635647 CPLX1O14810 134 aa17.08■□□□□ 0.33
PTBP1-221ENST00000635647 SLC27A2O14975 620 aa17.08■□□□□ 0.33
PTBP1-221ENST00000635647 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.33
PTBP1-221ENST00000635647 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.32
PTBP1-221ENST00000635647 GPTP24298 496 aa17.08■□□□□ 0.32
PTBP1-221ENST00000635647 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
PTBP1-221ENST00000635647 TTC14Q96N46 770 aa17.08■□□□□ 0.32
PTBP1-221ENST00000635647 DIP2BQ9P265 1576 aa17.08■□□□□ 0.32
PTBP1-221ENST00000635647 SASH1O94885 1247 aa17.07■□□□□ 0.32
PTBP1-221ENST00000635647 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
PTBP1-221ENST00000635647 ADCY9O60503 1353 aa17.07■□□□□ 0.32
PTBP1-221ENST00000635647 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
PTBP1-221ENST00000635647 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 CHGBP05060 677 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 TIMM10P62072 90 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 TFCP2Q12800 502 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 NOLC1Q14978 699 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■□□□ 11.7
PTBP1-221ENST00000635647 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 NRXN3Q9Y4C0 1643 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 C3P01024 1663 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 CCDC82Q8N4S0 544 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 SLFNL1Q499Z3 407 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 BRF1Q92994 677 aa17.06■□□□□ 0.32
PTBP1-221ENST00000635647 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTBP1-221ENST00000635647 JAK2O60674 1132 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 MCM5P33992 734 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-221ENST00000635647 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 HOXB7P09629 217 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.327e-8■■■□□ 17.9
PTBP1-221ENST00000635647 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 ZSWIM6Q9HCJ5 1215 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 LIG1P18858 919 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 ME1P48163 572 aa17.05■□□□□ 0.32
PTBP1-221ENST00000635647 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
PTBP1-221ENST00000635647 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
PTBP1-221ENST00000635647 TULP1O00294 542 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-221ENST00000635647 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
PTBP1-221ENST00000635647 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-221ENST00000635647 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
PTBP1-221ENST00000635647 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
PTBP1-221ENST00000635647 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-221ENST00000635647 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
PTBP1-221ENST00000635647 ZNF496Q96IT1 587 aaPredicted RBP17.03■□□□□ 0.32
PTBP1-221ENST00000635647 ZNF594Q96JF6 807 aaPredicted RBP17.03■□□□□ 0.32
PTBP1-221ENST00000635647 ZBTB22O15209 634 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 Q6ZUG5 572 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 DBNDD2Q9BQY9 259 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 UVSSAQ2YD98 709 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
PTBP1-221ENST00000635647 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
PTBP1-221ENST00000635647 ANO6Q4KMQ2 910 aa17.02■□□□□ 0.32
PTBP1-221ENST00000635647 NECTIN1Q15223 517 aa17.02■□□□□ 0.31
PTBP1-221ENST00000635647 HSPA2P54652 639 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 A0A087WWV3 80 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 TNNT3P45378 269 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-221ENST00000635647 GCKRQ14397 625 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 NFXL1Q6ZNB6 911 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 CCDC73Q6ZRK6 1079 aa17.01■□□□□ 0.31
PTBP1-221ENST00000635647 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
PTBP1-221ENST00000635647 POLR3DP05423 398 aaPredicted RBP17■□□□□ 0.31
PTBP1-221ENST00000635647 IGKV5-2P06315 115 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 TYRO3Q06418 890 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 MAP4K1Q92918 833 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 SCAND2PQ9GZW5 306 aaPredicted RBP17■□□□□ 0.31
PTBP1-221ENST00000635647 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 BIN1O00499 593 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
PTBP1-221ENST00000635647 DNAJC25Q9H1X3 360 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 PTGS1P23219 599 aa17■□□□□ 0.31
PTBP1-221ENST00000635647 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 NCOA5Q9HCD5 579 aaKnown RBP16.99■□□□□ 0.31
PTBP1-221ENST00000635647 DIP2AQ14689 1571 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 A1BGP04217 495 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
PTBP1-221ENST00000635647 DMTNQ08495 405 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 CCDC186Q7Z3E2 898 aa16.99■□□□□ 0.31
PTBP1-221ENST00000635647 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
PTBP1-221ENST00000635647 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
PTBP1-221ENST00000635647 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms