RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
SMARCA2-242ENST00000635530 SASH3O75995 380 aa11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 ABI2Q9NYB9 513 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 KIAA1522Q9P206 1035 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 CNTN3Q9P232 1028 aa11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-242ENST00000635530 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-242ENST00000635530 TARSP26639 723 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-242ENST00000635530 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
SMARCA2-242ENST00000635530 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
SMARCA2-242ENST00000635530 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
SMARCA2-242ENST00000635530 VEGFBP49765 207 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 CTBSQ01459 385 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 GAS6Q14393 721 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 C1orf127Q8N9H9 656 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
SMARCA2-242ENST00000635530 H3BM21 787 aa11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 MMP20O60882 483 aa11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 CPNE3O75131 537 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 PHACTR2O75167 634 aa11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 NEFLP07196 543 aa11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 NPAS3Q8IXF0 933 aa11.05□□□□□ -0.64
SMARCA2-242ENST00000635530 C2CD2LO14523 706 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 VSIG8P0DPA2 414 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 NFKB1P19838 968 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 TRERF1Q96PN7 1200 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-242ENST00000635530 EREGO14944 169 aa11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 CYP2E1P05181 493 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 RARAP10276 462 aa11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 ALG1LQ6GMV1 187 aa11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 GPR161Q8N6U8 529 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 OR13H1Q8NG92 308 aa11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 MRRFQ96E11 262 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-242ENST00000635530 MAP3K6O95382 1288 aa11.02□□□□□ -0.65
SMARCA2-242ENST00000635530 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
SMARCA2-242ENST00000635530 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-242ENST00000635530 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-242ENST00000635530 BHMTQ93088 406 aa11.01□□□□□ -0.65
SMARCA2-242ENST00000635530 CCDC74AQ96AQ1 378 aa11.01□□□□□ -0.65
SMARCA2-242ENST00000635530 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
SMARCA2-242ENST00000635530 VAMP1P23763 118 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 IRS1P35568 1242 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 SOX18P35713 384 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 FGD1P98174 961 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 TTC39BQ5VTQ0 682 aaPredicted RBP11□□□□□ -0.65
SMARCA2-242ENST00000635530 GALNT12Q8IXK2 581 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 PNMA5Q96PV4 448 aa11□□□□□ -0.65
SMARCA2-242ENST00000635530 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
SMARCA2-242ENST00000635530 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 DAB2P98082 770 aa10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 TMC4Q7Z404 712 aa10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
SMARCA2-242ENST00000635530 E9PSI1 815 aa10.98□□□□□ -0.65
SMARCA2-242ENST00000635530 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-242ENST00000635530 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
SMARCA2-242ENST00000635530 FAM161BQ96MY7 647 aa10.98□□□□□ -0.65
SMARCA2-242ENST00000635530 KIF4AO95239 1232 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 RECKO95980 971 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 CES1P23141 567 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 GNA15P30679 374 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 SALL4Q9UJQ4 1053 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
SMARCA2-242ENST00000635530 TERTO14746 1132 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 BMP4P12644 408 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 MX2P20592 715 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 SYT9Q86SS6 491 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 PMEPA1Q969W9 287 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 MDFIQ99750 246 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 IGSF5Q9NSI5 407 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 KLF15Q9UIH9 416 aa10.96□□□□□ -0.65
SMARCA2-242ENST00000635530 PSAPP07602 524 aa10.95□□□□□ -0.66
SMARCA2-242ENST00000635530 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCA2-242ENST00000635530 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
SMARCA2-242ENST00000635530 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-242ENST00000635530 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
SMARCA2-242ENST00000635530 PHF20L1A8MW92 1017 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 SIN3BO75182 1162 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 NRLP54845 237 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 GPLD1P80108 840 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 PLAURQ03405 335 aa10.94□□□□□ -0.66
SMARCA2-242ENST00000635530 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms