RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 ZNF280CQ8ND82 737 aa7.76□□□□□ -1.17
TRAPPC9-216ENST00000634178 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
TRAPPC9-216ENST00000634178 ZIC5Q96T25 663 aa7.76□□□□□ -1.17
TRAPPC9-216ENST00000634178 TGIF2Q9GZN2 237 aa7.76□□□□□ -1.17
TRAPPC9-216ENST00000634178 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 PHACTR2O75167 634 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 TNFRSF21O75509 655 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 ATP4AP20648 1035 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 GNL2Q13823 731 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 NT5DC4Q86YG4 428 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 IRF7Q92985 503 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 HSH2DQ96JZ2 352 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 SETDB2Q96T68 719 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 SRCIN1Q9C0H9 1055 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 ELP3Q9H9T3 547 aa7.75□□□□□ -1.17
TRAPPC9-216ENST00000634178 HMGXB3Q12766 1538 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 TTLL8A6PVC2 850 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 MSX1P28360 303 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 FANCCQ00597 558 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 C6orf118Q5T5N4 469 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 LRRC69Q6ZNQ3 347 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 CCDC74AQ96AQ1 378 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 CFHR5Q9BXR6 569 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 CCSER2Q9H7U1 834 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 ZFYVE28Q9HCC9 887 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
TRAPPC9-216ENST00000634178 A0A1W2PNR3 127 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 A6NHS1 94 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 C9orf131Q5VYM1 1079 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 NLRP8Q86W28 1048 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 METTL16Q86W50 562 aaKnown RBP7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 UBXN4Q92575 508 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 CEP63Q96MT8 703 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 C12orf49Q9H741 205 aa7.73□□□□□ -1.17
TRAPPC9-216ENST00000634178 EGFRP00533 1210 aa7.72□□□□□ -1.17
TRAPPC9-216ENST00000634178 RNF19AQ9NV58 838 aa7.72□□□□□ -1.17
TRAPPC9-216ENST00000634178 FAM8A1Q9UBU6 413 aa7.72□□□□□ -1.17
TRAPPC9-216ENST00000634178 DYRK1BQ9Y463 629 aa7.72□□□□□ -1.17
TRAPPC9-216ENST00000634178 ATAD2BQ9ULI0 1458 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 XYLBO75191 536 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 F11P03951 625 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 SAMD5Q5TGI4 173 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 SLC43A3Q8NBI5 491 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 FOXD3Q9UJU5 478 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 KCNMB2Q9Y691 235 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 LAMC3Q9Y6N6 1575 aa7.71□□□□□ -1.18
TRAPPC9-216ENST00000634178 NESP48681 1621 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 RHOQP17081 205 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 TYRO3Q06418 890 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 RAD51AP2Q09MP3 1159 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 FIGNL1Q6PIW4 674 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 HS2ST1Q7LGA3 356 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 NLRP13Q86W25 1043 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 ABI2Q9NYB9 513 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 SMARCA2P51531 1590 aa7.7□□□□□ -1.18
TRAPPC9-216ENST00000634178 GADD45BO75293 160 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 TAF1CQ15572 869 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 TRIP4Q15650 581 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 GALNT12Q8IXK2 581 aa7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 ZNF654Q8IZM8 581 aa7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 ZFP42Q96MM3 310 aa7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 SOS2Q07890 1332 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 USP31Q70CQ4 1352 aa7.69□□□□□ -1.18
TRAPPC9-216ENST00000634178 ST13P50502 369 aaKnown RBP7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 EPS8L3Q8TE67 593 aaKnown RBP7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 CAPN10Q9HC96 672 aa7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 TMEM63CQ9P1W3 806 aa7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 PPP1R1BQ9UD71 204 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 USP20Q9Y2K6 914 aa7.68□□□□□ -1.18
TRAPPC9-216ENST00000634178 FIGNL2A6NMB9 653 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 CTSHP09668 335 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 CES1P23141 567 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 KCNQ4P56696 695 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 PTPN12Q05209 780 aaKnown RBP7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
TRAPPC9-216ENST00000634178 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 EDN3P14138 238 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 GSTT1P30711 240 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 GSK3AP49840 483 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 SUZ12Q15022 739 aaKnown RBP7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 VPS37DQ86XT2 251 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 KLRG1Q96E93 195 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 OSBPL7Q9BZF2 842 aa7.66□□□□□ -1.18
TRAPPC9-216ENST00000634178 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms