RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	LARGE2	Q8N3Y3	721 aa		13.51	□□□□□ -0.25
UBE3A-223	ENST00000631247	CRAMP1	Q96RY5	1269 aa		13.51	□□□□□ -0.25
UBE3A-223	ENST00000631247	GJA3	Q9Y6H8	435 aa		13.51	□□□□□ -0.25
UBE3A-223	ENST00000631247	LAMB2	P55268	1798 aa		13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	SNED1	Q8TER0	1413 aa		13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	LMOD1	P29536	600 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	EPHX2	P34913	555 aa		13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	COPS6	Q7L5N1	327 aa		13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	PNMA8A	Q86V59	439 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	XAGE3	Q8WTP9	111 aa		13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
UBE3A-223	ENST00000631247	FZD9	O00144	591 aa		13.49	□□□□□ -0.25
UBE3A-223	ENST00000631247	HDGFL1	Q5TGJ6	251 aa		13.49	□□□□□ -0.25
UBE3A-223	ENST00000631247	LRP10	Q7Z4F1	713 aa		13.49	□□□□□ -0.25
UBE3A-223	ENST00000631247	NIM1K	Q8IY84	436 aa		13.49	□□□□□ -0.25
UBE3A-223	ENST00000631247	MKRN1	Q9UHC7	482 aa	Known RBP	13.49	□□□□□ -0.25
UBE3A-223	ENST00000631247	ABCC4	O15439	1325 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	CHL1	O00533	1208 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	PPIP5K2	O43314	1243 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	HSPA1A	P0DMV8	641 aa	Known RBP	13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	HSPA1B	P0DMV9	641 aa	Known RBP	13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	KRT24	Q2M2I5	525 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	C3orf67	Q6ZVT6	689 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	NLRP10	Q86W26	655 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	CHPF2	Q9P2E5	772 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	TRMT112	Q9UI30	125 aa	Known RBP	13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	ADAMTS8	Q9UP79	889 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	ADAMTSL1	Q8N6G6	1762 aa		13.48	□□□□□ -0.25
UBE3A-223	ENST00000631247	COL4A5	P29400	1685 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	SH3TC1	Q8TE82	1336 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	DDX46	Q7L014	1031 aa	Known RBP	13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	SUPT20H	Q8NEM7	779 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	SLC39A7	Q92504	469 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	TRIM35	Q9UPQ4	493 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	ATP6V0A2	Q9Y487	856 aa		13.47	□□□□□ -0.25
UBE3A-223	ENST00000631247	PASK	Q96RG2	1323 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	HOXB7	P09629	217 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	C7	P10643	843 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	HCLS1	P14317	486 aa	Predicted RBP	13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	TCIRG1	Q13488	830 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	SLC10A5	Q5PT55	438 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	DPP8	Q6V1X1	898 aa	Predicted RBP	13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	FAM212A	Q96EL1	285 aa		13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	DBF4	Q9UBU7	674 aa	Predicted RBP	13.46	□□□□□ -0.25
UBE3A-223	ENST00000631247	TMEM88B	A6NKF7	163 aa		13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	CALD1	Q05682	793 aa	Known RBP	13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	AOC3	Q16853	763 aa		13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	SLC51A	Q86UW1	340 aa		13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	CFAP44	Q96MT7	982 aa		13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	CNTNAP1	P78357	1384 aa		13.45	□□□□□ -0.26
UBE3A-223	ENST00000631247	DDX60	Q8IY21	1712 aa	Known RBP	13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	BBOX1	O75936	387 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	GRAP	Q13588	217 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	MAP1S	Q66K74	1059 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	TNS4	Q8IZW8	715 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	CNTROB	Q8N137	903 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	MPND	Q8N594	471 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	PLBD2	Q8NHP8	589 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	GRAPL	Q8TC17	118 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	ZNF428	Q96B54	188 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	VPS33B	Q9H267	617 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	HYPK	Q9NX55	129 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	METRN	Q9UJH8	293 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	LTBP1	Q14766	1721 aa		13.44	□□□□□ -0.26
UBE3A-223	ENST00000631247	POTEB2	H3BUK9	544 aa		13.43	□□□□□ -0.26
UBE3A-223	ENST00000631247	GOLGA2	Q08379	1002 aa		13.43	□□□□□ -0.26
UBE3A-223	ENST00000631247	DUSP27	Q5VZP5	1158 aa		13.43	□□□□□ -0.26
UBE3A-223	ENST00000631247	ANKRD13D	Q6ZTN6	518 aa		13.43	□□□□□ -0.26
UBE3A-223	ENST00000631247	ABT1	Q9ULW3	272 aa	Known RBP	13.43	□□□□□ -0.26
UBE3A-223	ENST00000631247	LRRC37A	A6NMS7	1700 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	ITGBL1	O95965	494 aa	Predicted RBP	13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	SCNN1D	P51172	638 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	ATN1	P54259	1190 aa	Predicted RBP	13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	TMC4	Q7Z404	712 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	SP8	Q8IXZ3	490 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	AIDA	Q96BJ3	306 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	MBIP	Q9NS73	344 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	ZNRF3	Q9ULT6	936 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	TAF1	P21675	1872 aa		13.42	□□□□□ -0.26
UBE3A-223	ENST00000631247	ATP5J2-PTCD1	G3V325	749 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	APAF1	O14727	1248 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	GNAI1	P63096	354 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	USP50	Q70EL3	339 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	RIC3	Q7Z5B4	369 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	FAM89A	Q96GI7	184 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	ADARB2	Q9NS39	739 aa	Known RBP	13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	IFT57	Q9NWB7	429 aa		13.41	□□□□□ -0.26
UBE3A-223	ENST00000631247	TIE1	P35590	1138 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	EPS15	P42566	896 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	RTL5	Q5HYW3	569 aa	Predicted RBP	13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	ISCA1	Q9BUE6	129 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	BCL2L13	Q9BXK5	485 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	TRPC6	Q9Y210	931 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	PCDHB13	Q9Y5F0	798 aa		13.4	□□□□□ -0.26
UBE3A-223	ENST00000631247	HSP90B1	P14625	803 aa	Known RBP	13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	VEGFB	P49765	207 aa		13.39	□□□□□ -0.27

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