RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 NFX1Q12986 1120 aaKnown RBP6.88□□□□□ -1.31
CDR1-202ENST00000625883 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 USPL1Q5W0Q7 1092 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
CDR1-202ENST00000625883 CPNE3O75131 537 aaKnown RBP6.87□□□□□ -1.31
CDR1-202ENST00000625883 ATP2B2Q01814 1243 aa6.87□□□□□ -1.31
CDR1-202ENST00000625883 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
CDR1-202ENST00000625883 ALG1LQ6GMV1 187 aa6.87□□□□□ -1.31
CDR1-202ENST00000625883 FOXR1Q6PIV2 292 aa6.87□□□□□ -1.31
CDR1-202ENST00000625883 FAM161BQ96MY7 647 aa6.87□□□□□ -1.31
CDR1-202ENST00000625883 RECKO95980 971 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 NEFLP07196 543 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 LAMC2Q13753 1193 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 NLRP13Q86W25 1043 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 GTPBP3Q969Y2 492 aaKnown RBP6.86□□□□□ -1.31
CDR1-202ENST00000625883 ABHD17AQ96GS6 310 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 GSX2Q9BZM3 304 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 CNTN3Q9P232 1028 aa6.86□□□□□ -1.31
CDR1-202ENST00000625883 SASH3O75995 380 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 DAB2P98082 770 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 FGD1P98174 961 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 CCINQ13939 588 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 C1orf127Q8N9H9 656 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 FBF1Q8TES7 1133 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
CDR1-202ENST00000625883 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
CDR1-202ENST00000625883 EREGO14944 169 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 PHACTR2O75167 634 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
CDR1-202ENST00000625883 VEGFBP49765 207 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 KRT25Q7Z3Z0 450 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 MARK1Q9P0L2 795 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
CDR1-202ENST00000625883 ATXN7L1Q9ULK2 861 aaPredicted RBP6.85□□□□□ -1.31
CDR1-202ENST00000625883 CYP2E1P05181 493 aaPredicted RBP6.84□□□□□ -1.31
CDR1-202ENST00000625883 CD33P20138 364 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 IRS1P35568 1242 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
CDR1-202ENST00000625883 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 PI16Q6UXB8 463 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 CCDC74AQ96AQ1 378 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
CDR1-202ENST00000625883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.84□□□□□ -1.31
CDR1-202ENST00000625883 CDC14CA4D256 554 aa6.83□□□□□ -1.32
CDR1-202ENST00000625883 GPR25O00155 361 aa6.83□□□□□ -1.32
CDR1-202ENST00000625883 MMP20O60882 483 aa6.83□□□□□ -1.32
CDR1-202ENST00000625883 POLR3DP05423 398 aaPredicted RBP6.83□□□□□ -1.32
CDR1-202ENST00000625883 GNA15P30679 374 aa6.83□□□□□ -1.32
CDR1-202ENST00000625883 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
CDR1-202ENST00000625883 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
CDR1-202ENST00000625883 NFKB1P19838 968 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 PSMD2Q13200 908 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDR1-202ENST00000625883 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
CDR1-202ENST00000625883 OR13H1Q8NG92 308 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 TRERF1Q96PN7 1200 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 BACH2Q9BYV9 841 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 NPHS2Q9NP85 383 aa6.82□□□□□ -1.32
CDR1-202ENST00000625883 SORBS3O60504 671 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 RARAP10276 462 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 FGFR3P22607 806 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 INSM1Q01101 510 aaPredicted RBP6.81□□□□□ -1.32
CDR1-202ENST00000625883 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
CDR1-202ENST00000625883 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
CDR1-202ENST00000625883 WIPF1O43516 503 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 CES1P23141 567 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 CTBSQ01459 385 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 BHMTQ93088 406 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 BCL11AQ9H165 835 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 MRS2Q9HD23 443 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 PHF24Q9UPV7 400 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.8□□□□□ -1.32
CDR1-202ENST00000625883 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
CDR1-202ENST00000625883 MAP3K6O95382 1288 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 TCF3P15923 654 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 PNMA5Q96PV4 448 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 OSBPL7Q9BZF2 842 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 EFCC1Q9HA90 598 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 SPG7Q9UQ90 795 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 C2CD2LO14523 706 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 CTSHP09668 335 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 HOXD8P13378 290 aaPredicted RBP6.79□□□□□ -1.32
CDR1-202ENST00000625883 SOX18P35713 384 aa6.79□□□□□ -1.32
CDR1-202ENST00000625883 GMPRP36959 345 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms