RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ANKRD36CQ5JPF3 1778 aa19.35■□□□□ 0.69
PNKP-218ENST00000625299 CA12O43570 354 aa19.35■□□□□ 0.69
PNKP-218ENST00000625299 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
PNKP-218ENST00000625299 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
PNKP-218ENST00000625299 RTFDC1Q9BY42 306 aaPredicted RBP19.35■□□□□ 0.69
PNKP-218ENST00000625299 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
PNKP-218ENST00000625299 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
PNKP-218ENST00000625299 KIAA2012Q0VF49 1180 aa19.34■□□□□ 0.69
PNKP-218ENST00000625299 TNIP1Q15025 636 aa19.34■□□□□ 0.69
PNKP-218ENST00000625299 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
PNKP-218ENST00000625299 SLC10A5Q5PT55 438 aa19.34■□□□□ 0.69
PNKP-218ENST00000625299 SP8Q8IXZ3 490 aa19.34■□□□□ 0.69
PNKP-218ENST00000625299 TAF1P21675 1872 aa19.33■□□□□ 0.69
PNKP-218ENST00000625299 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
PNKP-218ENST00000625299 SHTN1A0MZ66 631 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 BBOX1O75936 387 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 AIMP1Q12904 312 aaKnown RBP19.33■□□□□ 0.68
PNKP-218ENST00000625299 DGKZQ13574 1117 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 DDX46Q7L014 1031 aaKnown RBP19.33■□□□□ 0.68
PNKP-218ENST00000625299 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 NECTIN2Q92692 538 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 ZNF428Q96B54 188 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 HHIPL1Q96JK4 782 aa19.33■□□□□ 0.68
PNKP-218ENST00000625299 RGS19P49795 217 aa19.32■□□□□ 0.68
PNKP-218ENST00000625299 PDIA6Q15084 440 aa19.32■□□□□ 0.68
PNKP-218ENST00000625299 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
PNKP-218ENST00000625299 ZC3H15Q8WU90 426 aaKnown RBP19.32■□□□□ 0.68
PNKP-218ENST00000625299 PGAP2Q9UHJ9 254 aa19.32■□□□□ 0.68
PNKP-218ENST00000625299 CNOT7Q9UIV1 285 aaKnown RBP19.32■□□□□ 0.68
PNKP-218ENST00000625299 H7C1D1 291 aa19.31■□□□□ 0.68
PNKP-218ENST00000625299 GRAPQ13588 217 aa19.31■□□□□ 0.68
PNKP-218ENST00000625299 USP48Q86UV5 1035 aa19.31■□□□□ 0.68
PNKP-218ENST00000625299 NLRP10Q86W26 655 aa19.31■□□□□ 0.68
PNKP-218ENST00000625299 MICALL2Q8IY33 904 aa19.31■□□□□ 0.68
PNKP-218ENST00000625299 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
PNKP-218ENST00000625299 TRMT112Q9UI30 125 aaKnown RBP19.31■□□□□ 0.68
PNKP-218ENST00000625299 YDJCA8MPS7 323 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 HUNKP57058 714 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 DLK2Q6UY11 383 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 COPS6Q7L5N1 327 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 XAGE3Q8WTP9 111 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 ZIC5Q96T25 663 aa19.3■□□□□ 0.68
PNKP-218ENST00000625299 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
PNKP-218ENST00000625299 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
PNKP-218ENST00000625299 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
PNKP-218ENST00000625299 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
PNKP-218ENST00000625299 NOGQ13253 232 aa19.29■□□□□ 0.68
PNKP-218ENST00000625299 SAMD7Q7Z3H4 446 aa19.28■□□□□ 0.68
PNKP-218ENST00000625299 TBC1D10BQ4KMP7 808 aaPredicted RBP19.27■□□□□ 0.68
PNKP-218ENST00000625299 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.68
PNKP-218ENST00000625299 LRRC37AA6NMS7 1700 aa19.27■□□□□ 0.68
PNKP-218ENST00000625299 PSMD14O00487 310 aa19.26■□□□□ 0.67
PNKP-218ENST00000625299 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
PNKP-218ENST00000625299 RIPK4P57078 832 aa19.26■□□□□ 0.67
PNKP-218ENST00000625299 TCIRG1Q13488 830 aa19.26■□□□□ 0.67
PNKP-218ENST00000625299 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
PNKP-218ENST00000625299 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
PNKP-218ENST00000625299 WASHC4Q2M389 1173 aa19.25■□□□□ 0.67
PNKP-218ENST00000625299 KRT26Q7Z3Y9 468 aa19.25■□□□□ 0.67
PNKP-218ENST00000625299 NSFL1CQ9UNZ2 370 aaKnown RBP19.25■□□□□ 0.67
PNKP-218ENST00000625299 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
PNKP-218ENST00000625299 ADM5C9JUS6 153 aa19.24■□□□□ 0.67
PNKP-218ENST00000625299 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
PNKP-218ENST00000625299 EGFRP00533 1210 aa19.24■□□□□ 0.67
PNKP-218ENST00000625299 RGMBQ6NW40 437 aa19.24■□□□□ 0.67
PNKP-218ENST00000625299 TMC4Q7Z404 712 aa19.24■□□□□ 0.67
PNKP-218ENST00000625299 GBA2Q9HCG7 927 aaPredicted RBP19.24■□□□□ 0.67
PNKP-218ENST00000625299 C2orf69Q8N8R5 385 aa19.23■□□□□ 0.67
PNKP-218ENST00000625299 DPF2Q92785 391 aa19.23■□□□□ 0.67
PNKP-218ENST00000625299 DCPSQ96C86 337 aaKnown RBP19.23■□□□□ 0.67
PNKP-218ENST00000625299 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
PNKP-218ENST00000625299 CELF1Q92879 486 aaKnown RBP19.22■□□□□ 0.67
PNKP-218ENST00000625299 FAM155AB1AL88 458 aaPredicted RBP19.21■□□□□ 0.67
PNKP-218ENST00000625299 ECE2O60344 883 aa19.21■□□□□ 0.67
PNKP-218ENST00000625299 ZNF157P51786 506 aaPredicted RBP19.21■□□□□ 0.67
PNKP-218ENST00000625299 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
PNKP-218ENST00000625299 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
PNKP-218ENST00000625299 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
PNKP-218ENST00000625299 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
PNKP-218ENST00000625299 BABAM1Q9NWV8 329 aa19.21■□□□□ 0.67
PNKP-218ENST00000625299 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
PNKP-218ENST00000625299 AKAP11Q9UKA4 1901 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 TNRC18O15417 2968 aaPredicted RBP19.2■□□□□ 0.66
PNKP-218ENST00000625299 SOX10P56693 466 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 GPSM2P81274 684 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 LMOD3Q0VAK6 560 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 KCNQ5Q9NR82 932 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
PNKP-218ENST00000625299 COL4A1P02462 1669 aa19.2■□□□□ 0.66
PNKP-218ENST00000625299 RTL9Q8NET4 1388 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 ATP5J2-PTCD1G3V325 749 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 TRPA1O75762 1119 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 RPS12P25398 132 aaKnown RBP19.19■□□□□ 0.66
PNKP-218ENST00000625299 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 CCDC102AQ96A19 550 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 EYA3Q99504 573 aa19.19■□□□□ 0.66
PNKP-218ENST00000625299 SAGE1Q9NXZ1 904 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms