RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 NGEFQ8N5V2 710 aa7.68□□□□□ -1.18
LINC00963-215ENST00000622972 BRIP1Q9BX63 1249 aa7.68□□□□□ -1.18
LINC00963-215ENST00000622972 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
LINC00963-215ENST00000622972 NRXN2Q9P2S2 1712 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 ANKRD36CQ5JPF3 1778 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 ARFGEF2Q9Y6D5 1785 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 NUP98P52948 1817 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 SBF1O95248 1867 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 ARSIQ5FYB1 569 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
LINC00963-215ENST00000622972 NIP7Q9Y221 180 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00963-215ENST00000622972 SALL2Q9Y467 1007 aaPredicted RBP7.67□□□□□ -1.18
LINC00963-215ENST00000622972 CACNA1SQ13698 1873 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 CCDC88AQ3V6T2 1871 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 SEMA3EO15041 775 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 ERFEQ4G0M1 354 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 SMYD5Q6GMV2 418 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 CLEC4GQ6UXB4 293 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 TPTE2Q6XPS3 522 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 RBM46Q8TBY0 533 aaKnown RBP7.66□□□□□ -1.18
LINC00963-215ENST00000622972 DLEC1Q9Y238 1755 aa7.66□□□□□ -1.18
LINC00963-215ENST00000622972 GLTPD2A6NH11 291 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 CHL1O00533 1208 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 CACNA1FO60840 1977 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 MYL6BP14649 208 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 VEGFAP15692 232 aaPredicted RBP7.65□□□□□ -1.18
LINC00963-215ENST00000622972 UTRNP46939 3433 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 FSTL1Q12841 308 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 SOGA3Q5TF21 947 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 ANKRD31Q8N7Z5 1873 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 SMC1BQ8NDV3 1235 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 TSR2Q969E8 191 aaKnown RBP7.65□□□□□ -1.18
LINC00963-215ENST00000622972 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 MASTLQ96GX5 879 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 TNRC6CQ9HCJ0 1690 aaKnown RBP7.65□□□□□ -1.18
LINC00963-215ENST00000622972 MBIPQ9NS73 344 aa7.65□□□□□ -1.18
LINC00963-215ENST00000622972 ZC3H4Q9UPT8 1303 aaKnown RBP7.65□□□□□ -1.18
LINC00963-215ENST00000622972 NBPF26B4DH59 902 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 NFKBIEO00221 500 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 NUDT7P0C024 238 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 SRGNP10124 158 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 EIF4A1P60842 406 aaKnown RBP7.64□□□□□ -1.19
LINC00963-215ENST00000622972 STYK1Q6J9G0 422 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 GPR153Q6NV75 609 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
LINC00963-215ENST00000622972 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
LINC00963-215ENST00000622972 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 TAOK3Q9H2K8 898 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 TIAM2Q8IVF5 1701 aa7.64□□□□□ -1.19
LINC00963-215ENST00000622972 GOLGB1Q14789 3259 aaKnown RBP7.63□□□□□ -1.19
LINC00963-215ENST00000622972 FANCIQ9NVI1 1328 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 TESPA1A2RU30 521 aaPredicted RBP7.63□□□□□ -1.19
LINC00963-215ENST00000622972 NPR1P16066 1061 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 EIF2S2P20042 333 aaKnown RBP7.63□□□□□ -1.19
LINC00963-215ENST00000622972 HTRA3P83110 453 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 HLFQ16534 295 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 CCDC93Q567U6 631 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 LRP10Q7Z4F1 713 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 TSPYL6Q8N831 410 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.192e-13■■■■■ 28.4
LINC00963-215ENST00000622972 FAM163AQ96GL9 167 aaPredicted RBP7.63□□□□□ -1.19
LINC00963-215ENST00000622972 NYXQ9GZU5 481 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 TSPYL4Q9UJ04 414 aa7.63□□□□□ -1.19
LINC00963-215ENST00000622972 COL11A2P13942 1736 aaPredicted RBP7.63□□□□□ -1.19
LINC00963-215ENST00000622972 SLX4Q8IY92 1834 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 LAMB2P55268 1798 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
LINC00963-215ENST00000622972 GPTP24298 496 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 ALDH1B1P30837 517 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 PRELPP51888 382 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 LMOD3Q0VAK6 560 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 PROSER3Q2NL68 480 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 TRMT2AQ8IZ69 625 aaKnown RBP7.62□□□□□ -1.19
LINC00963-215ENST00000622972 C8orf58Q8NAV2 365 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 RPGRQ92834 1020 aaKnown RBP7.62□□□□□ -1.19
LINC00963-215ENST00000622972 ZBTB3Q9H5J0 574 aa7.62□□□□□ -1.19
LINC00963-215ENST00000622972 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
LINC00963-215ENST00000622972 WDR90Q96KV7 1748 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 IL16Q14005 1332 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 MAP3K15Q6ZN16 1313 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 ERVV-1B6SEH8 477 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 TCERG1O14776 1098 aaKnown RBP7.61□□□□□ -1.19
LINC00963-215ENST00000622972 DDNO94850 711 aaPredicted RBP7.61□□□□□ -1.19
LINC00963-215ENST00000622972 TTLL7Q6ZT98 887 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 NUTM1Q86Y26 1132 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 NECTIN2Q92692 538 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 DDX12PQ92771 950 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 TMX4Q9H1E5 349 aaPredicted RBP7.61□□□□□ -1.19
LINC00963-215ENST00000622972 IFT57Q9NWB7 429 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 FER1L6Q2WGJ9 1857 aa7.61□□□□□ -1.19
LINC00963-215ENST00000622972 DDX60Q8IY21 1712 aaKnown RBP7.61□□□□□ -1.19
LINC00963-215ENST00000622972 DICER1Q9UPY3 1922 aaKnown RBP7.6□□□□□ -1.19
LINC00963-215ENST00000622972 LTBP3Q9NS15 1303 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 ANXA1P04083 346 aa7.6□□□□□ -1.19
LINC00963-215ENST00000622972 MLLT3P42568 568 aaPredicted RBP7.6□□□□□ -1.19
LINC00963-215ENST00000622972 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.192e-9■■■□□ 15
LINC00963-215ENST00000622972 FKBP4Q02790 459 aaKnown RBP eCLIP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms