RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-229ENST00000621897 C20orf204Q6ZNR8 217 aa8.88□□□□□ -0.99
BRCA1-229ENST00000621897 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
BRCA1-229ENST00000621897 STIM2Q9P246 746 aa8.88□□□□□ -0.99
BRCA1-229ENST00000621897 KRBA1A5PL33 1030 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 XYLBO75191 536 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 EGFRP00533 1210 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 RARAP10276 462 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 ZAP70P43403 619 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 PLA2G4EQ3MJ16 856 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 PHLDB3Q6NSJ2 640 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 C11orf16Q9NQ32 467 aa8.87□□□□□ -0.99
BRCA1-229ENST00000621897 ZBTB42B2RXF5 422 aa8.86□□□□□ -0.99
BRCA1-229ENST00000621897 MAP3K6O95382 1288 aa8.86□□□□□ -0.99
BRCA1-229ENST00000621897 DHX32Q7L7V1 743 aaKnown RBP8.86□□□□□ -0.99
BRCA1-229ENST00000621897 MLLT1Q03111 559 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-229ENST00000621897 GPAT2Q6NUI2 795 aa8.85□□□□□ -0.99
BRCA1-229ENST00000621897 NUDT8Q8WV74 236 aa8.85□□□□□ -0.99
BRCA1-229ENST00000621897 PLVAPQ9BX97 442 aa8.85□□□□□ -0.99
BRCA1-229ENST00000621897 PIK3R2O00459 728 aa8.84□□□□□ -0.99
BRCA1-229ENST00000621897 NID1P14543 1247 aa8.84□□□□□ -0.99
BRCA1-229ENST00000621897 PSAPL1Q6NUJ1 521 aa8.84□□□□□ -0.99
BRCA1-229ENST00000621897 HELQQ8TDG4 1101 aa8.84□□□□□ -0.99
BRCA1-229ENST00000621897 PRDM6Q9NQX0 595 aa8.84□□□□□ -0.99
BRCA1-229ENST00000621897 CPB1P15086 417 aa8.83□□□□□ -1
BRCA1-229ENST00000621897 MTMR3Q13615 1198 aa8.83□□□□□ -1
BRCA1-229ENST00000621897 ATCAYQ86WG3 371 aa8.83□□□□□ -1
BRCA1-229ENST00000621897 ABTB2Q8N961 1025 aa8.83□□□□□ -1
BRCA1-229ENST00000621897 GPR152Q8TDT2 470 aa8.83□□□□□ -1
BRCA1-229ENST00000621897 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
BRCA1-229ENST00000621897 NOP53Q9NZM5 478 aaKnown RBP8.83□□□□□ -1
BRCA1-229ENST00000621897 MMP20O60882 483 aa8.82□□□□□ -1
BRCA1-229ENST00000621897 FAM35AQ86V20 835 aa8.82□□□□□ -1
BRCA1-229ENST00000621897 TRPM4Q8TD43 1214 aa8.82□□□□□ -1
BRCA1-229ENST00000621897 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
BRCA1-229ENST00000621897 FAM229AH3BQW9 127 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 GPLD1P80108 840 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 PLAURQ03405 335 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 HFE2Q6ZVN8 426 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 ALYREFQ86V81 257 aaKnown RBP8.81□□□□□ -1
BRCA1-229ENST00000621897 PIK3R5Q8WYR1 880 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 LPIN3Q9BQK8 851 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 TLR7Q9NYK1 1049 aaKnown RBP8.81□□□□□ -1
BRCA1-229ENST00000621897 USTQ9Y2C2 406 aa8.81□□□□□ -1
BRCA1-229ENST00000621897 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
BRCA1-229ENST00000621897 LILRB5O75023 590 aa8.8□□□□□ -1
BRCA1-229ENST00000621897 MPSTP25325 297 aa8.8□□□□□ -1
BRCA1-229ENST00000621897 PERM1Q5SV97 790 aa8.8□□□□□ -1
BRCA1-229ENST00000621897 NLRP13Q86W25 1043 aa8.8□□□□□ -1
BRCA1-229ENST00000621897 PROCP04070 461 aa8.79□□□□□ -1
BRCA1-229ENST00000621897 AFF1P51825 1210 aaKnown RBP8.79□□□□□ -1
BRCA1-229ENST00000621897 NRLP54845 237 aa8.79□□□□□ -1
BRCA1-229ENST00000621897 RETREG2Q8NC44 543 aa8.79□□□□□ -1
BRCA1-229ENST00000621897 SPOCK3Q9BQ16 436 aa8.79□□□□□ -1
BRCA1-229ENST00000621897 FAM13BQ9NYF5 915 aa8.79□□□□□ -1
BRCA1-229ENST00000621897 RGS9O75916 674 aaPredicted RBP8.78□□□□□ -1
BRCA1-229ENST00000621897 CHRNA4P43681 627 aa8.78□□□□□ -1
BRCA1-229ENST00000621897 GRIK5Q16478 980 aa8.78□□□□□ -1
BRCA1-229ENST00000621897 PCSK7Q16549 785 aa8.78□□□□□ -1
BRCA1-229ENST00000621897 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
BRCA1-229ENST00000621897 NSUN5Q96P11 429 aaKnown RBP8.78□□□□□ -1
BRCA1-229ENST00000621897 C1QTNF9BB2RNN3 333 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 J3QW42 95 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 PSAPP07602 524 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 EIF1AXP47813 144 aaKnown RBP8.77□□□□□ -1.01
BRCA1-229ENST00000621897 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
BRCA1-229ENST00000621897 CD163Q86VB7 1156 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 EDEM1Q92611 657 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
BRCA1-229ENST00000621897 MSTNO14793 375 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 IGHA1P01876 353 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 EIF2AK2P19525 551 aaKnown RBP8.76□□□□□ -1.01
BRCA1-229ENST00000621897 SOX18P35713 384 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 ZNF211Q13398 564 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-229ENST00000621897 ELMSAN1Q6PJG2 1045 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 SMG9Q9H0W8 520 aaKnown RBP8.76□□□□□ -1.01
BRCA1-229ENST00000621897 FRRS1LQ9P0K9 344 aa8.76□□□□□ -1.01
BRCA1-229ENST00000621897 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
BRCA1-229ENST00000621897 HOXD8P13378 290 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-229ENST00000621897 SIK1P57059 783 aa8.75□□□□□ -1.01
BRCA1-229ENST00000621897 DNM1Q05193 864 aaKnown RBP8.75□□□□□ -1.01
BRCA1-229ENST00000621897 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
BRCA1-229ENST00000621897 COL13A1Q5TAT6 717 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-229ENST00000621897 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
BRCA1-229ENST00000621897 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
BRCA1-229ENST00000621897 A6NHS1 94 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 SPDYE3A6NKU9 549 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 ABL1P00519 1130 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 PDGFAP04085 211 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 NPR3P17342 541 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-229ENST00000621897 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-229ENST00000621897 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 TMEM63CQ9P1W3 806 aa8.74□□□□□ -1.01
BRCA1-229ENST00000621897 FNDC3AQ9Y2H6 1198 aaKnown RBP8.74□□□□□ -1.01
BRCA1-229ENST00000621897 A0A0A0MRY4 1105 aa8.73□□□□□ -1.01
BRCA1-229ENST00000621897 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-229ENST00000621897 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
BRCA1-229ENST00000621897 GRIK4Q16099 956 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms