RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 EIF4A1P60842 406 aaKnown RBP11.22□□□□□ -0.61
GPC6-202ENST00000617456 DGKZQ13574 1117 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 PPP1R42Q7Z4L9 355 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
GPC6-202ENST00000617456 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
GPC6-202ENST00000617456 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 CASP8AP2Q9UKL3 1982 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
GPC6-202ENST00000617456 NUP98P52948 1817 aa11.21□□□□□ -0.61
GPC6-202ENST00000617456 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.61
GPC6-202ENST00000617456 ABCC4O15439 1325 aa11.21□□□□□ -0.61
GPC6-202ENST00000617456 CA12O43570 354 aa11.21□□□□□ -0.61
GPC6-202ENST00000617456 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
GPC6-202ENST00000617456 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
GPC6-202ENST00000617456 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
GPC6-202ENST00000617456 TRPM4Q8TD43 1214 aa11.21□□□□□ -0.61
GPC6-202ENST00000617456 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
GPC6-202ENST00000617456 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
GPC6-202ENST00000617456 HIRAP54198 1017 aaPredicted RBP11.2□□□□□ -0.62
GPC6-202ENST00000617456 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
GPC6-202ENST00000617456 MPNDQ8N594 471 aa11.2□□□□□ -0.62
GPC6-202ENST00000617456 BABAM1Q9NWV8 329 aa11.2□□□□□ -0.62
GPC6-202ENST00000617456 LAMB4A4D0S4 1761 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
GPC6-202ENST00000617456 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
GPC6-202ENST00000617456 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
GPC6-202ENST00000617456 TNIP1Q15025 636 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 CDC37L1Q7L3B6 337 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 VPS33BQ9H267 617 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
GPC6-202ENST00000617456 H7C1D1 291 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 ANXA1P04083 346 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 HUNKP57058 714 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 HHIPL1Q96JK4 782 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
GPC6-202ENST00000617456 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
GPC6-202ENST00000617456 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
GPC6-202ENST00000617456 BBOX1O75936 387 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 NOGQ13253 232 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 PROSER3Q2NL68 480 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 DDX46Q7L014 1031 aaKnown RBP11.17□□□□□ -0.62
GPC6-202ENST00000617456 SP8Q8IXZ3 490 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
GPC6-202ENST00000617456 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
GPC6-202ENST00000617456 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
GPC6-202ENST00000617456 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
GPC6-202ENST00000617456 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
GPC6-202ENST00000617456 PDE4CQ08493 712 aa11.16□□□□□ -0.62
GPC6-202ENST00000617456 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
GPC6-202ENST00000617456 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
GPC6-202ENST00000617456 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
GPC6-202ENST00000617456 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
GPC6-202ENST00000617456 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
GPC6-202ENST00000617456 ERBB4Q15303 1308 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 MAPK8IP3Q9UPT6 1336 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 SOX10P56693 466 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 GRAPQ13588 217 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 PDIA6Q15084 440 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 KRT26Q7Z3Y9 468 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
GPC6-202ENST00000617456 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 TRMT112Q9UI30 125 aaKnown RBP11.15□□□□□ -0.62
GPC6-202ENST00000617456 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
GPC6-202ENST00000617456 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
GPC6-202ENST00000617456 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 PSMD14O00487 310 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 LRP10Q7Z4F1 713 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
GPC6-202ENST00000617456 TRPA1O75762 1119 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 EGFRP00533 1210 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 ZNF157P51786 506 aaPredicted RBP11.13□□□□□ -0.63
GPC6-202ENST00000617456 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
GPC6-202ENST00000617456 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 C2orf69Q8N8R5 385 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
GPC6-202ENST00000617456 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
GPC6-202ENST00000617456 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
GPC6-202ENST00000617456 SH3TC1Q8TE82 1336 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms