RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 HSP90B1P14625 803 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 CLCN6P51797 869 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 CCAR2Q8N163 923 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 SLC52A1Q9NWF4 448 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 ZKSCAN1P17029 563 aaPredicted RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 EDC4Q6P2E9 1401 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 DHX40Q8IX18 779 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
MCM3-207ENST00000616552 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
MCM3-207ENST00000616552 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 AMPHP49418 695 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
MCM3-207ENST00000616552 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
MCM3-207ENST00000616552 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 FHOD1Q9Y613 1164 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 ADCY9O60503 1353 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 A0A1B0GVL5 298 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 H3BQV1 296 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 SMC2O95347 1197 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 PLA2G4AP47712 749 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
MCM3-207ENST00000616552 AIMP1Q12904 312 aaKnown RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 POLA2Q14181 598 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 AEBP2Q6ZN18 517 aaPredicted RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 LCMT1Q9UIC8 334 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 ALKQ9UM73 1620 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 AGLP35573 1532 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 TRIM66O15016 1216 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 SLU7O95391 586 aaKnown RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 TMC6Q7Z403 805 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 ARMCX5Q6P1M9 558 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 ZSWIM4Q9H7M6 989 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
MCM3-207ENST00000616552 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
MCM3-207ENST00000616552 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 SNW1Q13573 536 aaKnown RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 DPCR1Q3MIW9 517 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 DDX19AQ9NUU7 478 aaKnown RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 IFNKQ9P0W0 207 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 DNAI1Q9UI46 699 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 ATP1A3P13637 1013 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 SYCP1Q15431 976 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 Q6ZUG5 572 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 PPP1R13BQ96KQ4 1090 aa11.1□□□□□ -0.63
MCM3-207ENST00000616552 XPO4Q9C0E2 1151 aaKnown RBP11.1□□□□□ -0.63
MCM3-207ENST00000616552 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
MCM3-207ENST00000616552 MAP4K1Q92918 833 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 ZSCAN31Q96LW9 406 aaPredicted RBP11.09□□□□□ -0.63
MCM3-207ENST00000616552 GPHNQ9NQX3 736 aaPredicted RBP11.09□□□□□ -0.63
MCM3-207ENST00000616552 SASH3O75995 380 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 SASH1O94885 1247 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 ME1P48163 572 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 RESTQ13127 1097 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 SMARCE1Q969G3 411 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 COL15A1P39059 1388 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
MCM3-207ENST00000616552 SCRN1Q12765 414 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
MCM3-207ENST00000616552 C9orf78Q9NZ63 289 aaPredicted RBP11.09□□□□□ -0.63
MCM3-207ENST00000616552 CRYBG1Q9Y4K1 1723 aa11.08□□□□□ -0.64
MCM3-207ENST00000616552 GNAT3A8MTJ3 354 aa11.08□□□□□ -0.64
MCM3-207ENST00000616552 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 POLR3DP05423 398 aaPredicted RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 RAD51AP2Q09MP3 1159 aa11.08□□□□□ -0.64
MCM3-207ENST00000616552 RBM43Q6ZSC3 357 aaKnown RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 APOBRQ0VD83 1088 aa11.08□□□□□ -0.64
MCM3-207ENST00000616552 FSIP1Q8NA03 581 aa11.08□□□□□ -0.64
MCM3-207ENST00000616552 CEP170BQ9Y4F5 1589 aaPredicted RBP11.08□□□□□ -0.64
MCM3-207ENST00000616552 PREX1Q8TCU6 1659 aa11.07□□□□□ -0.64
MCM3-207ENST00000616552 ELP1O95163 1332 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms