RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 ZNF462Q96JM2 2506 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 COL1A1P02452 1464 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 IGF1RP08069 1367 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 OTOL1A6NHN0 477 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 FBLL1A6NHQ2 334 aaKnown RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 SPDYE3A6NKU9 549 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 C9orf172C9J069 976 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 H3BNC9 293 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 MASP2O00187 686 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PER1O15534 1290 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 NUAK1O60285 661 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 TRIM13O60858 407 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 TGFB1P01137 390 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 KRT3P12035 628 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 GLDCP23378 1020 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 COL8A2P25067 703 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 CD38P28907 300 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 FUSP35637 526 aaKnown RBP eCLIP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 DGKGP49619 791 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 VASPP50552 380 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 BCAMP50895 628 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ARSDP51689 593 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 GAS6Q14393 721 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 EML3Q32P44 896 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 RC3H1Q5TC82 1133 aaKnown RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 MAMDC4Q6UXC1 1216 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PRR23CQ6ZRP0 262 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 C1QL2Q7Z5L3 287 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 LAPTM4BQ86VI4 370 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 TMPRSS12Q86WS5 348 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 TMEM151BQ8IW70 566 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ZNF276Q8N554 614 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 SHKBP1Q8TBC3 707 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 HPS1Q92902 700 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ZNF837Q96EG3 531 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ABHD17AQ96GS6 310 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 KCNH8Q96L42 1107 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 MTRQ99707 1265 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 SPAG8Q99932 426 aaPredicted RBP-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 BDH2Q9BUT1 245 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PRR14Q9BWN1 585 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 C1QTNF7Q9BXJ2 289 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 IGFLR1Q9H665 355 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PDGFCQ9NRA1 345 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 DIAPH3Q9NSV4 1193 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 SMPD4Q9NXE4 827 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PTGFRNQ9P2B2 879 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 CLIP2Q9UDT6 1046 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 LHX6Q9UPM6 363 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 TAF6LQ9Y6J9 622 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 FAT3Q8TDW7 4589 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ICE1Q9Y2F5 2266 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 NF1P21359 2839 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 ZNF292O60281 2723 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 BDP1A6H8Y1 2624 aa-0.53□□□□□ -2.49
SOX2-OT-236ENST00000616401 PDZD2O15018 2839 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 COL1A2P08123 1366 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 COL5A1P20908 1838 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 EME2A4GXA9 379 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 SHISA8B8ZZ34 492 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 ZNF500O60304 480 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 SRFP11831 508 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 BMP1P13497 986 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 CD99P14209 185 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 YY1P25490 414 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 TKTP29401 623 aaKnown RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 ADRA1BP35368 520 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 MCAMP43121 646 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 FOXG1P55316 489 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 LINC00310P59036 64 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 NRG1Q02297 640 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 EIF4EBP2Q13542 120 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 MBTPS1Q14703 1052 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 ZIK1Q3SY52 487 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 MIDNQ504T8 468 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 KANK4Q5T7N3 995 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 GFI1BQ5VTD9 330 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 FAM198BQ6UWH4 519 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 NFXL1Q6ZNB6 911 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 KRTAP19-3Q7Z4W3 81 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 ZNF467Q7Z7K2 595 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 VSIG10LQ86VR7 867 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 NLGN2Q8NFZ4 835 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 NTNG2Q96CW9 530 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 SAMD11Q96NU1 681 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 MBNL3Q9NUK0 354 aaKnown RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 ZNF446Q9NWS9 450 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 TSC22D4Q9Y3Q8 395 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 CCDC61Q9Y6R9 512 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 DNHD1Q96M86 4753 aa-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 COL3A1P02461 1466 aaPredicted RBP-0.54□□□□□ -2.5
SOX2-OT-236ENST00000616401 CUL9Q8IWT3 2517 aa-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 UBR5O95071 2799 aaPredicted RBP-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 KAT6AQ92794 2004 aa-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 PTPRZ1P23471 2315 aaPredicted RBP-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 IGKV6-21A0A0C4DH24 114 aa-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 TCAF2A6NFQ2 919 aa-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 KRTAP16-1A8MUX0 517 aa-0.55□□□□□ -2.5
SOX2-OT-236ENST00000616401 WNT7AO00755 349 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms