RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CC2D1AQ6P1N0 951 aaPredicted RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 CCDC121Q6ZUS5 278 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 TDRD7Q8NHU6 1098 aaKnown RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 MRFAP1L1Q96HT8 127 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 MPHOSPH8Q99549 860 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 PAIP2Q9BPZ3 127 aaKnown RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 KCNG1Q9UIX4 513 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 WWC2Q6AWC2 1192 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 MICAL1Q8TDZ2 1067 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 LEO1Q8WVC0 666 aaPredicted RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 BRF1Q92994 677 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 SAMM50Q9Y512 469 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 CTAGE9A4FU28 777 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 CCT4P50991 539 aaKnown RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 BRD3Q15059 726 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 E2F5Q15329 346 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 CAPZA3Q96KX2 299 aa15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 BAG1Q99933 345 aaPredicted RBP15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 SPATS2LQ9NUQ6 558 aaKnown RBP15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 CCDC175P0C221 793 aa15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 CCT2P78371 535 aaKnown RBP15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
PPP4R3B-205ENST00000616288 POLR3DP05423 398 aaPredicted RBP15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 HSP90AB4PQ58FF6 505 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 CUL4AQ13619 759 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 PACS2Q86VP3 889 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 ARHGAP45Q92619 1136 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 CABS1Q96KC9 395 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 MIS18AQ9NYP9 233 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 MTMR6Q9Y217 621 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 FHOD1Q9Y613 1164 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 ZNF446Q9NWS9 450 aa15.55■□□□□ 0.08
PPP4R3B-205ENST00000616288 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 G3BP1Q13283 466 aaKnown RBP eCLIP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 FBXW10Q5XX13 1052 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 TEFQ10587 303 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 CPLX2Q6PUV4 134 aaKnown RBP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 B4GALNT4Q76KP1 1039 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 CTCFLQ8NI51 663 aaPredicted RBP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 CALR3Q96L12 384 aaKnown RBP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 PRPF38AQ8NAV1 312 aaKnown RBP15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 PPFIA4O75335 1185 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 VAMP4O75379 141 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 DNA2P51530 1060 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 GOLGA8FQ08AF8 430 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 GOLGA8DPQ0D2H9 430 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 DESI2Q9BSY9 194 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 IMPACTQ9P2X3 320 aa15.54■□□□□ 0.08
PPP4R3B-205ENST00000616288 POLR3AO14802 1390 aaPredicted RBP15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 FCHSD2O94868 740 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 TXLNAP40222 546 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 C11orf57Q6ZUT1 292 aaPredicted RBP15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 SIRT1Q96EB6 747 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 GGT6Q6P531 493 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 TAX1BP1Q86VP1 789 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 RABGGTAQ92696 567 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 DONSONQ9NYP3 566 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 FANCCQ00597 558 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
PPP4R3B-205ENST00000616288 VIRMAQ69YN4 1812 aaKnown RBP15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 GNGT1P63211 74 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 IQCEQ6IPM2 695 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 FAM71BQ8TC56 605 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 IRAK4Q9NWZ3 460 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 PPIP5K1Q6PFW1 1433 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 PSDA5PKW4 1024 aaPredicted RBP15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 PIP4K2BP78356 416 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 STIM1Q13586 685 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 HINFPQ9BQA5 517 aa15.52■□□□□ 0.08
PPP4R3B-205ENST00000616288 JMYQ8N9B5 988 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 JADE2Q9NQC1 790 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 FAM83GA6ND36 823 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 HSF2BPO75031 334 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 RNF40O75150 1001 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 RBBP5Q15291 538 aaKnown RBP15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 MAATS1Q7Z4T9 603 aa15.52■□□□□ 0.07
PPP4R3B-205ENST00000616288 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
PPP4R3B-205ENST00000616288 PSEN1P49768 467 aa15.51■□□□□ 0.07
PPP4R3B-205ENST00000616288 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
PPP4R3B-205ENST00000616288 BAIAP2L1Q9UHR4 511 aa15.51■□□□□ 0.07
PPP4R3B-205ENST00000616288 CCDC151A5D8V7 595 aa15.51■□□□□ 0.07
PPP4R3B-205ENST00000616288 SF3A3Q12874 501 aaKnown RBP eCLIP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms