RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TRAK2O60296 914 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 FILIP1LQ4L180 1135 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 KRT23Q9C075 422 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 SSRP1Q08945 709 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 C8orf76Q96K31 380 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 OFD1O75665 1012 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 SDSP20132 328 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 EYA2O00167 538 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 GNAT2P19087 354 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 TFCP2Q12800 502 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 CNNM2Q9H8M5 875 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 USP19O94966 1318 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 IGSF1Q8N6C5 1336 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 ITGA6P23229 1130 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 ZHX3Q9H4I2 956 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 ADGRL3Q9HAR2 1447 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 HAND2P61296 217 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 RLBP1P12271 317 aa11.03□□□□□ -0.64
CLTCL1-208ENST00000615606 HCLS1P14317 486 aaPredicted RBP11.02□□□□□ -0.64
CLTCL1-208ENST00000615606 MCM5P33992 734 aa11.02□□□□□ -0.64
CLTCL1-208ENST00000615606 CCDC70Q6NSX1 233 aa11.02□□□□□ -0.64
CLTCL1-208ENST00000615606 ESR2Q92731 530 aa11.02□□□□□ -0.64
CLTCL1-208ENST00000615606 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.64
CLTCL1-208ENST00000615606 LMTK2Q8IWU2 1503 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 SPATA31A3Q5VYP0 1347 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 BLMP54132 1417 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 MAGEB6P1A0A0J9YX57 407 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 H0YIN7 160 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 GIGYF1O75420 1035 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 SSBP05455 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 RXRBP28702 533 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 TNMDQ9H2S6 317 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 CROCC2H7BZ55 1655 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 TSPY26PQ9H489 355 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 TNNQ9UQP3 1299 aa11.02□□□□□ -0.65
CLTCL1-208ENST00000615606 ERBB3P21860 1342 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 RNF113AO15541 343 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 TRAF1Q13077 416 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 DIP2CQ9Y2E4 1556 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 CCDC194A0A1B0GVG4 234 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 NLRP5P59047 1200 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 CEP57L1Q8IYX8 460 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 RAB34Q9BZG1 259 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 UFL1O94874 794 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 NF2P35240 595 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 GCKRQ14397 625 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 WDR78Q5VTH9 848 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 UNC5CLQ8IV45 518 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
CLTCL1-208ENST00000615606 TSPY3P0CV98 308 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 TSPY8P0CW00 308 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 TCIRG1Q13488 830 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 CCDC82Q8N4S0 544 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 GGA1Q9UJY5 639 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
CLTCL1-208ENST00000615606 ALKQ9UM73 1620 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 WTAPQ15007 396 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 CT47A1Q5JQC4 288 aaPredicted RBP11□□□□□ -0.65
CLTCL1-208ENST00000615606 SKAP1Q86WV1 359 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 METAP2P50579 478 aaKnown RBP eCLIP11□□□□□ -0.65
CLTCL1-208ENST00000615606 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 AGLP35573 1532 aa11□□□□□ -0.65
CLTCL1-208ENST00000615606 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 STX8Q9UNK0 236 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 CCT2P78371 535 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 PICALMQ13492 652 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 TMEM266Q2M3C6 531 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 GLI2P10070 1586 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 SIK1P57059 783 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 PDILTQ8N807 584 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms