RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 EYA2O00167 538 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 EPB41L2O43491 1005 aaKnown RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 ATP5JP18859 108 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 SIK1P57059 783 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 NUCB2P80303 420 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 NMIQ13287 307 aaPredicted RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 MYH14Q7Z406 1995 aaKnown RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 TIMM10P62072 90 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 RASEFQ8IZ41 740 aa23.11■■□□□ 1.29
MMP28-204ENST00000615136 ISY1Q9ULR0 285 aaKnown RBP23.11■■□□□ 1.29
MMP28-204ENST00000615136 UBN2Q6ZU65 1347 aa23.1■■□□□ 1.29
MMP28-204ENST00000615136 CHGBP05060 677 aa23.1■■□□□ 1.29
MMP28-204ENST00000615136 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
MMP28-204ENST00000615136 PALLDQ8WX93 1383 aa23.1■■□□□ 1.29
MMP28-204ENST00000615136 A0A0D9SFI3 127 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 IL15P40933 162 aaPredicted RBP23.09■■□□□ 1.29
MMP28-204ENST00000615136 VPS72Q15906 364 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 CSF1RP07333 972 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 NEUROD6Q96NK8 337 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 CCDC87Q9NVE4 849 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 SNX14Q9Y5W7 946 aa23.09■■□□□ 1.29
MMP28-204ENST00000615136 ZGPATQ8N5A5 531 aaKnown RBP23.08■■□□□ 1.29
MMP28-204ENST00000615136 BAG4O95429 457 aaKnown RBP23.08■■□□□ 1.28
MMP28-204ENST00000615136 CCDC57Q2TAC2 916 aa23.08■■□□□ 1.28
MMP28-204ENST00000615136 KIAA1211Q6ZU35 1233 aa23.08■■□□□ 1.28
MMP28-204ENST00000615136 RUFY2Q8WXA3 655 aa23.08■■□□□ 1.28
MMP28-204ENST00000615136 ERVV-1B6SEH8 477 aa23.07■■□□□ 1.28
MMP28-204ENST00000615136 XRCC6P12956 609 aaKnown RBP eCLIP23.07■■□□□ 1.28
MMP28-204ENST00000615136 HSP90AB3PQ58FF7 597 aa23.07■■□□□ 1.28
MMP28-204ENST00000615136 NOL8Q76FK4 1167 aaKnown RBP23.07■■□□□ 1.28
MMP28-204ENST00000615136 DNAJC2Q99543 621 aaKnown RBP23.07■■□□□ 1.28
MMP28-204ENST00000615136 ZNF609O15014 1411 aa23.07■■□□□ 1.28
MMP28-204ENST00000615136 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
MMP28-204ENST00000615136 GOLGA6L22H0YM25 854 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 CIAO1O76071 339 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 MCM2P49736 904 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 RREB1Q92766 1687 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
MMP28-204ENST00000615136 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
MMP28-204ENST00000615136 TRMT112Q9UI30 125 aaKnown RBP23.06■■□□□ 1.28
MMP28-204ENST00000615136 KCNQ4P56696 695 aa23.05■■□□□ 1.28
MMP28-204ENST00000615136 TMX3Q96JJ7 454 aa23.05■■□□□ 1.28
MMP28-204ENST00000615136 GREM2Q9H772 168 aa23.05■■□□□ 1.28
MMP28-204ENST00000615136 GPR108Q9NPR9 543 aa23.05■■□□□ 1.28
MMP28-204ENST00000615136 A0A1B0GUL7 405 aa23.04■■□□□ 1.28
MMP28-204ENST00000615136 ZNF589Q86UQ0 364 aaPredicted RBP23.04■■□□□ 1.28
MMP28-204ENST00000615136 HAUS7Q99871 368 aa23.04■■□□□ 1.28
MMP28-204ENST00000615136 RTN4Q9NQC3 1192 aaKnown RBP23.04■■□□□ 1.28
MMP28-204ENST00000615136 CCDC171Q6TFL3 1326 aa23.04■■□□□ 1.28
MMP28-204ENST00000615136 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
MMP28-204ENST00000615136 MRE11P49959 708 aa23.04■■□□□ 1.28
MMP28-204ENST00000615136 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
MMP28-204ENST00000615136 PKP1Q13835 747 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 SNRKQ9NRH2 765 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 CICQ96RK0 1608 aaPredicted RBP23.03■■□□□ 1.28
MMP28-204ENST00000615136 MED23Q9ULK4 1368 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 HIP1O00291 1037 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 CTSWP56202 376 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 IFIT5Q13325 482 aaKnown RBP23.03■■□□□ 1.28
MMP28-204ENST00000615136 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
MMP28-204ENST00000615136 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
MMP28-204ENST00000615136 MYH3P11055 1940 aa23.02■■□□□ 1.28
MMP28-204ENST00000615136 CPA1P15085 419 aa23.02■■□□□ 1.28
MMP28-204ENST00000615136 ITGA6P23229 1130 aa23.02■■□□□ 1.28
MMP28-204ENST00000615136 USP21Q9UK80 565 aa23.02■■□□□ 1.28
MMP28-204ENST00000615136 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 CAMTA2O94983 1202 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 COL5A3P25940 1745 aaPredicted RBP23.01■■□□□ 1.27
MMP28-204ENST00000615136 ADORA1P30542 326 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 NECTIN1Q15223 517 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 ADCK5Q3MIX3 580 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 SLFNL1Q499Z3 407 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 SUSD4Q5VX71 490 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 CEP126Q9P2H0 1117 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 CUL4AQ13619 759 aa23.01■■□□□ 1.27
MMP28-204ENST00000615136 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
MMP28-204ENST00000615136 RBM8AQ9Y5S9 174 aaKnown RBP23.01■■□□□ 1.27
MMP28-204ENST00000615136 RIC1Q4ADV7 1423 aa23■■□□□ 1.27
MMP28-204ENST00000615136 COL9A3Q14050 684 aaPredicted RBP23■■□□□ 1.27
MMP28-204ENST00000615136 KLHL40Q2TBA0 621 aa23■■□□□ 1.27
MMP28-204ENST00000615136 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
MMP28-204ENST00000615136 MAP4K1Q92918 833 aa23■■□□□ 1.27
MMP28-204ENST00000615136 LINC00116Q8NCU8 138 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 TTC14Q96N46 770 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 GOLIM4O00461 696 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 SMIM5Q71RC9 77 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 FAM43AQ8N2R8 423 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 KCNB2Q92953 911 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 GRPEL1Q9HAV7 217 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 RIPOR2Q9Y4F9 1068 aa22.99■■□□□ 1.27
MMP28-204ENST00000615136 CCDC129Q6ZRS4 1044 aa22.98■■□□□ 1.27
MMP28-204ENST00000615136 SMARCC1Q92922 1105 aaPredicted RBP22.98■■□□□ 1.27
MMP28-204ENST00000615136 LARP6Q9BRS8 491 aaKnown RBP22.98■■□□□ 1.27
MMP28-204ENST00000615136 ZDHHC9Q9Y397 364 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms