RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 BICC1Q9H694 974 aaKnown RBP7.78□□□□□ -1.16
CBWD3-210ENST00000614398 COPRSQ9NQ92 184 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 PODXL2Q9NZ53 605 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 ABCC12Q96J65 1359 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-210ENST00000614398 GPTP24298 496 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 CIAO1O76071 339 aa7.77□□□□□ -1.16
CBWD3-210ENST00000614398 CRY2Q49AN0 593 aa7.77□□□□□ -1.16
CBWD3-210ENST00000614398 HSP90AB4PQ58FF6 505 aa7.77□□□□□ -1.16
CBWD3-210ENST00000614398 EPHA10Q5JZY3 1008 aa7.77□□□□□ -1.16
CBWD3-210ENST00000614398 NBPF5PQ86XG9 351 aaPredicted RBP7.77□□□□□ -1.16
CBWD3-210ENST00000614398 RAB11FIP3O75154 756 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 SERPINB2P05120 415 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 PRR5LQ6MZQ0 368 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 CNBD1Q8NA66 436 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 TTLL11Q8NHH1 800 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 CCDC136Q96JN2 1154 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 LTBP1Q14766 1721 aa7.77□□□□□ -1.17
CBWD3-210ENST00000614398 ZBTB22O15209 634 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 HOXA10P31260 410 aaPredicted RBP7.76□□□□□ -1.17
CBWD3-210ENST00000614398 ST5P78524 1137 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 SMIM5Q71RC9 77 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 FAM89AQ96GI7 184 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 MTFR1LQ9H019 292 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 PNMA6EA0A0J9YXQ4 647 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 CCDC152Q4G0S7 254 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 ARXQ96QS3 562 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 BRIP1Q9BX63 1249 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 C1orf115Q9H7X2 142 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 PARP3Q9Y6F1 533 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 BRCA1P38398 1863 aaKnown RBP7.76□□□□□ -1.17
CBWD3-210ENST00000614398 SPEF2Q9C093 1822 aa7.76□□□□□ -1.17
CBWD3-210ENST00000614398 SRGAP3O43295 1099 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 IGHDP01880 384 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 LMBR1LQ6UX01 489 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 MMP10P09238 476 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 GPR108Q9NPR9 543 aa7.75□□□□□ -1.17
CBWD3-210ENST00000614398 NUCB1Q02818 461 aa7.74□□□□□ -1.17
CBWD3-210ENST00000614398 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
CBWD3-210ENST00000614398 NLRP3Q96P20 1036 aa7.74□□□□□ -1.17
CBWD3-210ENST00000614398 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
CBWD3-210ENST00000614398 ANKRD18BA2A2Z9 1011 aa7.74□□□□□ -1.17
CBWD3-210ENST00000614398 PDE6BP35913 854 aa7.74□□□□□ -1.17
CBWD3-210ENST00000614398 IL15P40933 162 aaPredicted RBP7.73□□□□□ -1.17
CBWD3-210ENST00000614398 IFIT5Q13325 482 aaKnown RBP7.73□□□□□ -1.17
CBWD3-210ENST00000614398 STYK1Q6J9G0 422 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 CDC5LQ99459 802 aaKnown RBP7.73□□□□□ -1.17
CBWD3-210ENST00000614398 COL4A1P02462 1669 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 EYA2O00167 538 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
CBWD3-210ENST00000614398 CCDC57Q2TAC2 916 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 FAM161AQ3B820 660 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 BICDL1Q6ZP65 573 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 NUTM1Q86Y26 1132 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 KIF1BPQ96EK5 621 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 GREM2Q9H772 168 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 AOX1Q06278 1338 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 ZNF609O15014 1411 aa7.73□□□□□ -1.17
CBWD3-210ENST00000614398 ITGA6P23229 1130 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 MROH5Q6ZUA9 1318 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 ARFGEF1Q9Y6D6 1849 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 DUOX1Q9NRD9 1551 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 NPR1P16066 1061 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 GTF2E1P29083 439 aaPredicted RBP7.72□□□□□ -1.17
CBWD3-210ENST00000614398 GRAPQ13588 217 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 C3orf67Q6ZVT6 689 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 GRAPLQ8TC17 118 aaPredicted RBP7.72□□□□□ -1.17
CBWD3-210ENST00000614398 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
CBWD3-210ENST00000614398 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
CBWD3-210ENST00000614398 RIPOR2Q9Y4F9 1068 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 SALL3Q9BXA9 1300 aa7.72□□□□□ -1.17
CBWD3-210ENST00000614398 POLD1P28340 1107 aa7.71□□□□□ -1.17
CBWD3-210ENST00000614398 G3BP1Q13283 466 aaKnown RBP eCLIP7.71□□□□□ -1.17
CBWD3-210ENST00000614398 R3HDM1Q15032 1099 aaKnown RBP7.71□□□□□ -1.17
CBWD3-210ENST00000614398 VGLL2Q8N8G2 317 aa7.71□□□□□ -1.17
CBWD3-210ENST00000614398 LRRCC1Q9C099 1032 aa7.71□□□□□ -1.17
CBWD3-210ENST00000614398 BSDC1Q9NW68 430 aaPredicted RBP7.71□□□□□ -1.17
CBWD3-210ENST00000614398 CD2APQ9Y5K6 639 aa7.71□□□□□ -1.17
CBWD3-210ENST00000614398 SNED1Q8TER0 1413 aa7.71□□□□□ -1.17
CBWD3-210ENST00000614398 SOCS7O14512 581 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 SURF6O75683 361 aaKnown RBP7.71□□□□□ -1.18
CBWD3-210ENST00000614398 BBOX1O75936 387 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 SRGNP10124 158 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 PTGER2P43116 358 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 TGFB2P61812 414 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 CHD1LQ86WJ1 897 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 RHPN1Q8TCX5 695 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
CBWD3-210ENST00000614398 SASH1O94885 1247 aa7.7□□□□□ -1.18
CBWD3-210ENST00000614398 IGHMBP2P38935 993 aaKnown RBP7.7□□□□□ -1.18
CBWD3-210ENST00000614398 C15orf52Q6ZUT6 534 aaKnown RBP7.7□□□□□ -1.18
CBWD3-210ENST00000614398 DDX46Q7L014 1031 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms