RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 ZBTB7AO95365 584 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 PRR5LQ6MZQ0 368 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 C3orf67Q6ZVT6 689 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 CCDC85AQ96PX6 553 aaPredicted RBP19.41■□□□□ 0.7
CCL3-206ENST00000614051 PLA2G12BQ9BX93 195 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 TNRC6CQ9HCJ0 1690 aaKnown RBP19.41■□□□□ 0.7
CCL3-206ENST00000614051 PDE8AO60658 829 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
CCL3-206ENST00000614051 CNBD1Q8NA66 436 aa19.41■□□□□ 0.7
CCL3-206ENST00000614051 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
CCL3-206ENST00000614051 SLC16A10Q8TF71 515 aa19.4■□□□□ 0.7
CCL3-206ENST00000614051 CHMP3Q9Y3E7 222 aa19.4■□□□□ 0.7
CCL3-206ENST00000614051 PARP3Q9Y6F1 533 aa19.4■□□□□ 0.7
CCL3-206ENST00000614051 CTSWP56202 376 aa19.39■□□□□ 0.69
CCL3-206ENST00000614051 MTX1Q13505 466 aa19.39■□□□□ 0.69
CCL3-206ENST00000614051 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
CCL3-206ENST00000614051 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
CCL3-206ENST00000614051 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
CCL3-206ENST00000614051 HDAC1Q13547 482 aaPredicted RBP19.38■□□□□ 0.69
CCL3-206ENST00000614051 TTLL11Q8NHH1 800 aa19.38■□□□□ 0.69
CCL3-206ENST00000614051 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
CCL3-206ENST00000614051 RWDD1Q9H446 243 aaPredicted RBP19.38■□□□□ 0.69
CCL3-206ENST00000614051 TAF1P21675 1872 aa19.37■□□□□ 0.69
CCL3-206ENST00000614051 CSF1RP07333 972 aa19.37■□□□□ 0.69
CCL3-206ENST00000614051 POLA2Q14181 598 aa19.37■□□□□ 0.69
CCL3-206ENST00000614051 FAM161AQ3B820 660 aa19.37■□□□□ 0.69
CCL3-206ENST00000614051 ST5P78524 1137 aa19.36■□□□□ 0.69
CCL3-206ENST00000614051 KLHDC4Q8TBB5 520 aa19.36■□□□□ 0.69
CCL3-206ENST00000614051 MTFR1LQ9H019 292 aa19.36■□□□□ 0.69
CCL3-206ENST00000614051 GREM2Q9H772 168 aa19.36■□□□□ 0.69
CCL3-206ENST00000614051 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
CCL3-206ENST00000614051 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
CCL3-206ENST00000614051 HMMRO75330 724 aa19.35■□□□□ 0.69
CCL3-206ENST00000614051 CAPN15O75808 1086 aa19.35■□□□□ 0.69
CCL3-206ENST00000614051 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
CCL3-206ENST00000614051 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
CCL3-206ENST00000614051 ZNF594Q96JF6 807 aaPredicted RBP19.35■□□□□ 0.69
CCL3-206ENST00000614051 COL4A1P02462 1669 aa19.34■□□□□ 0.69
CCL3-206ENST00000614051 SPEF2Q9C093 1822 aa19.34■□□□□ 0.69
CCL3-206ENST00000614051 YY1P25490 414 aa19.34■□□□□ 0.69
CCL3-206ENST00000614051 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
CCL3-206ENST00000614051 PTGER2P43116 358 aa19.33■□□□□ 0.68
CCL3-206ENST00000614051 SF3B3Q15393 1217 aaKnown RBP19.33■□□□□ 0.68
CCL3-206ENST00000614051 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
CCL3-206ENST00000614051 EXOC6BQ9Y2D4 811 aa19.33■□□□□ 0.68
CCL3-206ENST00000614051 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
CCL3-206ENST00000614051 ITGA6P23229 1130 aa19.32■□□□□ 0.68
CCL3-206ENST00000614051 PTPN12Q05209 780 aaKnown RBP19.32■□□□□ 0.68
CCL3-206ENST00000614051 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
CCL3-206ENST00000614051 SIL1Q9H173 461 aa19.32■□□□□ 0.68
CCL3-206ENST00000614051 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
CCL3-206ENST00000614051 APBB1O00213 710 aa19.31■□□□□ 0.68
CCL3-206ENST00000614051 SURF6O75683 361 aaKnown RBP19.31■□□□□ 0.68
CCL3-206ENST00000614051 IFIT5Q13325 482 aaKnown RBP19.31■□□□□ 0.68
CCL3-206ENST00000614051 CCDC57Q2TAC2 916 aa19.31■□□□□ 0.68
CCL3-206ENST00000614051 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
CCL3-206ENST00000614051 COL11A2P13942 1736 aaPredicted RBP19.31■□□□□ 0.68
CCL3-206ENST00000614051 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
CCL3-206ENST00000614051 ANKRD18BA2A2Z9 1011 aa19.29■□□□□ 0.68
CCL3-206ENST00000614051 SMC5Q8IY18 1101 aa19.29■□□□□ 0.68
CCL3-206ENST00000614051 RTL9Q8NET4 1388 aa19.29■□□□□ 0.68
CCL3-206ENST00000614051 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
CCL3-206ENST00000614051 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
CCL3-206ENST00000614051 POLD1P28340 1107 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 TAF7LQ5H9L4 462 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 SKAP1Q86WV1 359 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 GCC1Q96CN9 775 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 SYT17Q9BSW7 474 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
CCL3-206ENST00000614051 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.67
CCL3-206ENST00000614051 SMARCA5O60264 1052 aaPredicted RBP19.27■□□□□ 0.67
CCL3-206ENST00000614051 CRY2Q49AN0 593 aa19.27■□□□□ 0.67
CCL3-206ENST00000614051 LRRC24Q50LG9 513 aa19.27■□□□□ 0.67
CCL3-206ENST00000614051 CELF1Q92879 486 aaKnown RBP19.27■□□□□ 0.67
CCL3-206ENST00000614051 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.67
CCL3-206ENST00000614051 CACNA1SQ13698 1873 aa19.26■□□□□ 0.67
CCL3-206ENST00000614051 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCL3-206ENST00000614051 OS9Q13438 667 aaPredicted RBP19.26■□□□□ 0.67
CCL3-206ENST00000614051 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
CCL3-206ENST00000614051 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
CCL3-206ENST00000614051 FHDC1Q9C0D6 1143 aaPredicted RBP19.26■□□□□ 0.67
CCL3-206ENST00000614051 KIF13BQ9NQT8 1826 aa19.26■□□□□ 0.67
CCL3-206ENST00000614051 PDE6BP35913 854 aa19.25■□□□□ 0.67
CCL3-206ENST00000614051 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
CCL3-206ENST00000614051 ATG9AQ7Z3C6 839 aa19.25■□□□□ 0.67
CCL3-206ENST00000614051 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
CCL3-206ENST00000614051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.25■□□□□ 0.67
CCL3-206ENST00000614051 EYA2O00167 538 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 SASH1O94885 1247 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 CHRNA5P30532 468 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 LDHAL6AQ6ZMR3 332 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 C2CD5Q86YS7 1000 aa19.24■□□□□ 0.67
CCL3-206ENST00000614051 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
CCL3-206ENST00000614051 SRGNP10124 158 aa19.23■□□□□ 0.67
CCL3-206ENST00000614051 NUCB1Q02818 461 aa19.23■□□□□ 0.67
CCL3-206ENST00000614051 SLC51AQ86UW1 340 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms