RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 FBXO9Q9UK97 447 aaPredicted RBP6.64□□□□□ -1.35
CCL16-206ENST00000613642 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
CCL16-206ENST00000613642 FSD2A1L4K1 749 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 TMCO5BA8MYB1 307 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 NBPF7P0C2Y1 421 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 SLURP2P0DP57 97 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 ITGA6P23229 1130 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 TRPC1P48995 793 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 GYS2P54840 703 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 GSCP56915 257 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 ZNF385CQ66K41 422 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 RMDN2Q96LZ7 410 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 ZNF396Q96N95 335 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 INSM2Q96T92 566 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
CCL16-206ENST00000613642 IQCGQ9H095 443 aaKnown RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 RSPH9Q9H1X1 276 aaPredicted RBP6.63□□□□□ -1.35
CCL16-206ENST00000613642 CUX2O14529 1486 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 SENP3-EIF4A1A0A087X0R7 540 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 HTATSF1O43719 755 aaKnown RBP6.62□□□□□ -1.35
CCL16-206ENST00000613642 CCDC175P0C221 793 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 TCF3P15923 654 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 EIF5P55010 431 aaKnown RBP6.62□□□□□ -1.35
CCL16-206ENST00000613642 RELBQ01201 579 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 RASSF7Q02833 373 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 TRAF1Q13077 416 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 MCM6Q14566 821 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 RASA3Q14644 834 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 HS1BP3Q53T59 392 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 SASS6Q6UVJ0 657 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 OTUD6AQ7L8S5 288 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 FILIP1Q7Z7B0 1213 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 CATIPQ7Z7H3 387 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 NLRP13Q86W25 1043 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 FMNL3Q8IVF7 1028 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 IQCF2Q8IXL9 164 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 VWA5B2Q8N398 1253 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 TMEM151AQ8N4L1 468 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 EPS8L1Q8TE68 723 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
CCL16-206ENST00000613642 C17orf50Q8WW18 174 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 BHMTQ93088 406 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 TMPRSS4Q9NRS4 437 aa6.62□□□□□ -1.35
CCL16-206ENST00000613642 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
CCL16-206ENST00000613642 PUF60Q9UHX1 559 aaKnown RBP6.62□□□□□ -1.35
CCL16-206ENST00000613642 SMARCA2P51531 1590 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 CFAP69A5D8W1 941 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 LILRA1O75019 489 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 ARHGEF15O94989 841 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 SKILP12757 684 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 PSMD2Q13200 908 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 TMED1Q13445 227 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 IRF5Q13568 498 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 SV2AQ7L0J3 742 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
CCL16-206ENST00000613642 SREK1Q8WXA9 508 aaKnown RBP6.61□□□□□ -1.35
CCL16-206ENST00000613642 PMM1Q92871 262 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 KIF2CQ99661 725 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 MMTAG2Q9BU76 263 aaKnown RBP6.61□□□□□ -1.35
CCL16-206ENST00000613642 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 ZNF395Q9H8N7 513 aaPredicted RBP6.61□□□□□ -1.35
CCL16-206ENST00000613642 UPF2Q9HAU5 1272 aaKnown RBP6.61□□□□□ -1.35
CCL16-206ENST00000613642 ETAA1Q9NY74 926 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 TBC1D2BQ9UPU7 963 aa6.61□□□□□ -1.35
CCL16-206ENST00000613642 PRDM2Q13029 1718 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 CCDC194A0A1B0GVG4 234 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 RNF225M0QZC1 329 aaPredicted RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 TIMM44O43615 452 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 AP1G2O75843 785 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 GDF11O95390 407 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 ADH1AP07327 375 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 MSNP26038 577 aaKnown RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 ADD1P35611 737 aaKnown RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 BMS1Q14692 1282 aaKnown RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 SUZ12Q15022 739 aaKnown RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 PDCD2Q16342 344 aaPredicted RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 TSNAXIP1Q2TAA8 658 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 MFSD4BQ5TF39 518 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 C16orf87Q6PH81 154 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 TAX1BP1Q86VP1 789 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 PDCL2Q8N4E4 241 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 TEKT1Q969V4 418 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 RETREG1Q9H6L5 497 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 RMI1Q9H9A7 625 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 VEZTQ9HBM0 779 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 POLMQ9NP87 494 aaPredicted RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 NRBP1Q9UHY1 535 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 ODF2LQ9ULJ1 636 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
CCL16-206ENST00000613642 NCAPD3P42695 1498 aa6.6□□□□□ -1.35
CCL16-206ENST00000613642 ERVH48-1M5A8F1 160 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 KCNA2P16389 499 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms