RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 GOLGA6AQ9NYA3 693 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 RPAP2Q8IXW5 612 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 GAS8O95995 478 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 HS1BP3Q53T59 392 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 FOXO3O43524 673 aa13.74□□□□□ -0.21
SLC6A6-204ENST00000613060 TSPY3P0CV98 308 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 TSPY8P0CW00 308 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 MAP7D1Q3KQU3 841 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 CHMP6Q96FZ7 201 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 IMPG2Q9BZV3 1241 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 MXRA7P84157 204 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 FBF1Q8TES7 1133 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 KIAA0753Q2KHM9 967 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 TSR2Q969E8 191 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 TTLL3Q9Y4R7 772 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
SLC6A6-204ENST00000613060 SORBS3O60504 671 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 TTF1Q15361 905 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 APBA3O96018 575 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 KRT13P13646 458 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 STX8Q9UNK0 236 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-204ENST00000613060 A0A1W2PRG0 241 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 FAM13AO94988 1023 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 BAG6P46379 1132 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 SCAND2PQ9GZW5 306 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 DAPK3O43293 454 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
SLC6A6-204ENST00000613060 ATP6V1E1P36543 226 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 PTPN14Q15678 1187 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 CEP112Q8N8E3 955 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 SPDYE6P0CI01 402 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.22
SLC6A6-204ENST00000613060 UBA7P41226 1012 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 CHD1LQ86WJ1 897 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 MCM10Q7L590 875 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 MSANTD4Q8NCY6 345 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 CCDC114Q96M63 670 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 ZNF569Q5MCW4 686 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 CCDC50Q8IVM0 306 aa13.7□□□□□ -0.22
SLC6A6-204ENST00000613060 CKAP4Q07065 602 aaKnown RBP13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 MAATS1Q7Z4T9 603 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 DAAM2Q86T65 1068 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 WDR63Q8IWG1 891 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 GOLIM4O00461 696 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■□ 24.8
SLC6A6-204ENST00000613060 RAB11FIP4Q86YS3 637 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 CCDC77Q9BR77 488 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 FAM169AQ9Y6X4 670 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 ESYT2A0FGR8 921 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 CTAGE5O15320 804 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 URI1O94763 535 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 ERCC3P19447 782 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 PRPHP41219 470 aa13.69□□□□□ -0.22
SLC6A6-204ENST00000613060 CAMK4Q16566 473 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms