RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 POLR3DP05423 398 aaPredicted RBP10.9□□□□□ -0.67
SRGAP2B-204ENST00000612199 RBM10P98175 930 aaKnown RBP10.9□□□□□ -0.67
SRGAP2B-204ENST00000612199 SDSP20132 328 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 TMEM259Q4ZIN3 620 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 ACBD5Q5T8D3 534 aaPredicted RBP10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 HMGB2P26583 209 aaKnown RBP10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 ZCRB1Q8TBF4 217 aaKnown RBP10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 KCNA6P17658 529 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 CUL4BQ13620 913 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 CFAP58Q5T655 872 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 NFATC2IPQ8NCF5 419 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 EVI5LQ96CN4 794 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 SPATA17Q96L03 361 aa10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 PA2G4Q9UQ80 394 aaKnown RBP10.89□□□□□ -0.67
SRGAP2B-204ENST00000612199 WDR62O43379 1518 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 MAFGO15525 162 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 SLC5A1P13866 664 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 NUCB1Q02818 461 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 CWC15Q9P013 229 aaKnown RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 PRC1O43663 620 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 TTC21AQ8NDW8 1320 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 CCDC66A2RUB6 948 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 KIF2AO00139 706 aaPredicted RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
SRGAP2B-204ENST00000612199 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 GOLGA8BA8MQT2 603 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 EYA1Q99502 592 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 NOD1Q9Y239 953 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 IFIT3O14879 490 aaKnown RBP10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 PFDN4Q9NQP4 134 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 ERLIN1O75477 346 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 CWF19L2Q2TBE0 894 aaKnown RBP10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 VAMP4O75379 141 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 TERF1P54274 439 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 KLHL10Q6JEL2 608 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 TSNARE1Q96NA8 513 aa10.87□□□□□ -0.67
SRGAP2B-204ENST00000612199 LMBR1LQ6UX01 489 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 ANO10Q9NW15 660 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 POLR3AO14802 1390 aaPredicted RBP10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 FBXW4P57775 412 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 PDE1AP54750 535 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 ANKFY1Q9P2R3 1169 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 GJB2P29033 226 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 ARID5AQ03989 594 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 MICU3Q86XE3 530 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 ZNF287Q9HBT7 754 aa10.86□□□□□ -0.67
SRGAP2B-204ENST00000612199 FAM184BQ9ULE4 1060 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 MSH6P52701 1360 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 CTAGE5O15320 804 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 MAP3K19Q56UN5 1328 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 GRM8O00222 908 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 GCP02774 474 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 SFPQP23246 707 aaKnown RBP eCLIP10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 CCDC129Q6ZRS4 1044 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 GABPAQ06546 454 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 CFAP100Q494V2 611 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 NPHP3Q7Z494 1330 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 PANK2Q9BZ23 570 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 CTCFLQ8NI51 663 aaPredicted RBP10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 WDR48Q8TAF3 677 aa10.85□□□□□ -0.67
SRGAP2B-204ENST00000612199 NPATQ14207 1427 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 PHAXQ9H814 394 aaKnown RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 ZMYM3Q14202 1370 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 ZNF444Q8N0Y2 327 aaPredicted RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 TEX13AQ9BXU3 409 aaPredicted RBP10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 PZPP20742 1482 aa10.84□□□□□ -0.67
SRGAP2B-204ENST00000612199 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms